1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.F00438.1

Brara.F00438.1


Description : beta-galactosidase *(BGAL7) & EC_3.2 glycosylase


Gene families : OG_42_0000109 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000109_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F00438.1
Cluster HCAA Clusters: Cluster_402

Target Alias Description ECC score Gene Family Method Actions
A4A49_26724 No alias beta-galactosidase 0.03 Orthogroups_2024-Update
Brara.K00159.1 No alias beta-galactosidase *(BGAL1) & EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
PSME_00012040-RA No alias (p45582|bgal_aspof : 84.3) Beta-galactosidase precursor... 0.01 Orthogroups_2024-Update
Potri.004G036000 No alias beta-galactosidase 3 0.03 Orthogroups_2024-Update
Sobic.002G279900.1 No alias beta-galactosidase *(MUM2) & EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Solyc07g042220 No alias Beta-galactosidase (AHRD V3.3 *** A0A022QEX1_ERYGU) 0.02 Orthogroups_2024-Update
Sopen02g029390 No alias Glycosyl hydrolases family 35 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
InterPro domains Description Start Stop
IPR000922 Lectin_gal-bd_dom 741 818
IPR031330 Gly_Hdrlase_35_cat 28 331
No external refs found!