Description : component *(uS8) of small ribosomal-subunit (SSU) proteome
Gene families : OG_42_0001161 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001161_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.F00468.1 | |
Cluster | HCAA Clusters: Cluster_167 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
228163 | No alias | Ribosomal protein S8 family protein | 0.11 | Orthogroups_2024-Update | |
At5g59850 | No alias | AT1G07770 protein [Source:UniProtKB/TrEMBL;Acc:B9DI04] | 0.08 | Orthogroups_2024-Update | |
Bradi2g23110 | No alias | ribosomal protein S15A | 0.21 | Orthogroups_2024-Update | |
Bradi2g54450 | No alias | ribosomal protein S15A | 0.22 | Orthogroups_2024-Update | |
Brara.J01354.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.06 | Orthogroups_2024-Update | |
Cre05.g234637 | No alias | Ribosomal protein S8 family protein | 0.21 | Orthogroups_2024-Update | |
GRMZM2G083497 | No alias | ribosomal protein S15A | 0.11 | Orthogroups_2024-Update | |
Glyma.01G240000 | No alias | ribosomal protein S15A | 0.07 | Orthogroups_2024-Update | |
Glyma.07G255500 | No alias | ribosomal protein S15A | 0.12 | Orthogroups_2024-Update | |
Glyma.11G003600 | No alias | ribosomal protein S15A | 0.09 | Orthogroups_2024-Update | |
Glyma.11G003700 | No alias | ribosomal protein S15A | 0.09 | Orthogroups_2024-Update | |
Glyma.15G102550 | No alias | ribosomal protein S15A | 0.17 | Orthogroups_2024-Update | |
Glyma.17G018600 | No alias | ribosomal protein S15A | 0.18 | Orthogroups_2024-Update | |
HORVU1Hr1G072060.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.09 | Orthogroups_2024-Update | |
HORVU3Hr1G086930.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.12 | Orthogroups_2024-Update | |
Kfl00864_0040 | kfl00864_0040_v1.1 | (at5g59850 : 230.0) Ribosomal protein S8 family protein;... | 0.1 | Orthogroups_2024-Update | |
LOC_Os02g27760 | No alias | 40S ribosomal protein S15a, putative, expressed | 0.03 | Orthogroups_2024-Update | |
LOC_Os07g10720 | No alias | 40S ribosomal protein S15a, putative, expressed | 0.09 | Orthogroups_2024-Update | |
MA_10427318g0020 | No alias | (at3g46040 : 214.0) Regulated by TCP20.; ribosomal... | 0.08 | Orthogroups_2024-Update | |
MA_57835g0010 | No alias | (at3g46040 : 223.0) Regulated by TCP20.; ribosomal... | 0.14 | Orthogroups_2024-Update | |
Mp8g06510.1 | No alias | component RPS15a of SSU proteome | 0.08 | Orthogroups_2024-Update | |
Mp8g13010.1 | No alias | component RPS15a of SSU proteome | 0.1 | Orthogroups_2024-Update | |
PSME_00001830-RA | No alias | (at5g59850 : 244.0) Ribosomal protein S8 family protein;... | 0.03 | Orthogroups_2024-Update | |
PSME_00015526-RA | No alias | (at5g59850 : 244.0) Ribosomal protein S8 family protein;... | 0.06 | Orthogroups_2024-Update | |
Potri.001G118100 | No alias | ribosomal protein S15A | 0.1 | Orthogroups_2024-Update | |
Potri.010G208700 | No alias | Ribosomal protein S8 family protein | 0.07 | Orthogroups_2024-Update | |
Pp1s115_101V6 | No alias | 40s ribosomal protein s15a | 0.15 | Orthogroups_2024-Update | |
Pp1s1_304V6 | No alias | 40s ribosomal protein s15a | 0.1 | Orthogroups_2024-Update | |
Pp1s426_18V6 | No alias | 40s ribosomal protein s15a | 0.17 | Orthogroups_2024-Update | |
Pp1s45_88V6 | No alias | 40s ribosomal protein s15a | 0.2 | Orthogroups_2024-Update | |
Pp1s61_209V6 | No alias | 40s ribosomal protein s15a | 0.09 | Orthogroups_2024-Update | |
Seita.2G319400.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.24 | Orthogroups_2024-Update | |
Seita.5G374600.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.11 | Orthogroups_2024-Update | |
Seita.8G174900.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.02 | Orthogroups_2024-Update | |
Sobic.003G012700.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.17 | Orthogroups_2024-Update | |
Sobic.007G212600.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.24 | Orthogroups_2024-Update | |
Sopen04g025860 | No alias | Ribosomal protein S8 | 0.19 | Orthogroups_2024-Update | |
Sopen04g026010 | No alias | Ribosomal protein S8 | 0.09 | Orthogroups_2024-Update | |
Sopen04g026020 | No alias | Ribosomal protein S8 | 0.28 | Orthogroups_2024-Update | |
evm.model.contig_2045.5 | No alias | (at5g59850 : 190.0) Ribosomal protein S8 family protein;... | 0.22 | Orthogroups_2024-Update | |
evm.model.tig00000158.110 | No alias | (q9at34|rs15a_dauca : 210.0) 40S ribosomal protein S15a... | 0.19 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | 16Dec |
CC | GO:0005840 | ribosome | IEA | 16Dec |
BP | GO:0006412 | translation | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000295 | adenine nucleotide transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
MF | GO:0004017 | adenylate kinase activity | IEP | Predicted GO |
MF | GO:0004455 | ketol-acid reductoisomerase activity | IEP | Predicted GO |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Predicted GO |
MF | GO:0005346 | purine ribonucleotide transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0005347 | ATP transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0005471 | ATP:ADP antiporter activity | IEP | Predicted GO |
BP | GO:0006082 | organic acid metabolic process | IEP | Predicted GO |
BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
BP | GO:0006414 | translational elongation | IEP | Predicted GO |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Predicted GO |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Predicted GO |
BP | GO:0006862 | nucleotide transport | IEP | Predicted GO |
MF | GO:0008097 | 5S rRNA binding | IEP | Predicted GO |
MF | GO:0008509 | anion transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0008514 | organic anion transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0009081 | branched-chain amino acid metabolic process | IEP | Predicted GO |
BP | GO:0009082 | branched-chain amino acid biosynthetic process | IEP | Predicted GO |
MF | GO:0015215 | nucleotide transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015216 | purine nucleotide transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015217 | ADP transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015238 | drug transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015301 | anion:anion antiporter activity | IEP | Predicted GO |
MF | GO:0015605 | organophosphate ester transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0015748 | organophosphate ester transport | IEP | Predicted GO |
CC | GO:0015934 | large ribosomal subunit | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Predicted GO |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
MF | GO:0016776 | phosphotransferase activity, phosphate group as acceptor | IEP | Predicted GO |
MF | GO:0016874 | ligase activity | IEP | Predicted GO |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Predicted GO |
MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Predicted GO |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
BP | GO:0043038 | amino acid activation | IEP | Predicted GO |
BP | GO:0043039 | tRNA aminoacylation | IEP | Predicted GO |
BP | GO:0043436 | oxoacid metabolic process | IEP | Predicted GO |
BP | GO:0044281 | small molecule metabolic process | IEP | Predicted GO |
CC | GO:0044391 | ribosomal subunit | IEP | Predicted GO |
MF | GO:0050145 | nucleoside monophosphate kinase activity | IEP | Predicted GO |
MF | GO:0099516 | ion antiporter activity | IEP | Predicted GO |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Predicted GO |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000630 | Ribosomal_S8 | 7 | 130 |
No external refs found! |