1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.F00475.1

Brara.F00475.1


Description : Unknown function


Gene families : OG_42_0000679 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000679_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F00475.1
Cluster HCAA Clusters: Cluster_325

Target Alias Description ECC score Gene Family Method Actions
At2g31820 No alias Ankyrin repeat family protein... 0.03 Orthogroups_2024-Update
At3g12360 No alias Ankyrin repeat-containing protein ITN1... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR026961 PGG_dom 345 461
IPR002110 Ankyrin_rpt 229 289
IPR002110 Ankyrin_rpt 15 85
IPR002110 Ankyrin_rpt 163 228
IPR002110 Ankyrin_rpt 92 155
No external refs found!