Description : transcription factor *(A/B-GATA)
Gene families : OG_42_0000071 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000071_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.F00491.1 | |
Cluster | HCAA Clusters: Cluster_83 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
405209 | No alias | GATA transcription factor 20 | 0.02 | Orthogroups_2024-Update | |
A4A49_15410 | No alias | gata transcription factor 12 | 0.02 | Orthogroups_2024-Update | |
At4g36620 | No alias | GATA transcription factor 19... | 0.04 | Orthogroups_2024-Update | |
Bradi2g35057 | No alias | GATA transcription factor 23 | 0.03 | Orthogroups_2024-Update | |
Bradi3g08240 | No alias | GATA type zinc finger transcription factor family protein | 0.06 | Orthogroups_2024-Update | |
Glyma.14G094800 | No alias | cytokinin-responsive gata factor 1 | 0.04 | Orthogroups_2024-Update | |
Potri.001G188500 | No alias | GATA transcription factor 9 | 0.03 | Orthogroups_2024-Update | |
Potri.008G038900 | No alias | GATA transcription factor 9 | 0.02 | Orthogroups_2024-Update | |
Seita.1G358400.1 | No alias | transcription factor *(A/B-GATA) | 0.04 | Orthogroups_2024-Update | |
Seita.9G325200.1 | No alias | transcription factor *(A/B-GATA) | 0.02 | Orthogroups_2024-Update | |
Sobic.009G050600.1 | No alias | transcription factor *(A/B-GATA) | 0.06 | Orthogroups_2024-Update | |
Solyc01g090760 | No alias | GATA transcription factor (AHRD V3.3 *** K4AZ17_SOLLC) | 0.03 | Orthogroups_2024-Update | |
Sopen09g030410 | No alias | GATA zinc finger | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | 16Dec |
MF | GO:0043565 | sequence-specific DNA binding | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000272 | polysaccharide catabolic process | IEP | Predicted GO |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Predicted GO |
CC | GO:0005667 | transcription factor complex | IEP | Predicted GO |
MF | GO:0016160 | amylase activity | IEP | Predicted GO |
MF | GO:0016161 | beta-amylase activity | IEP | Predicted GO |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Predicted GO |
MF | GO:0032182 | ubiquitin-like protein binding | IEP | Predicted GO |
MF | GO:0035091 | phosphatidylinositol binding | IEP | Predicted GO |
MF | GO:0043130 | ubiquitin binding | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000679 | Znf_GATA | 208 | 241 |
No external refs found! |