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  5. Brara.F00647.1

Brara.F00647.1


Description : Unknown function


Gene families : OG_42_0000589 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000589_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F00647.1
Cluster HCAA Clusters: Cluster_236

Target Alias Description ECC score Gene Family Method Actions
A4A49_01931 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Brara.I04573.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Mp2g13590.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
Potri.002G110300 No alias Rhamnogalacturonate lyase family protein 0.03 Orthogroups_2024-Update
Sopen11g006070 No alias Rhamnogalacturonate lyase family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR010325 Rhamnogal_lyase 48 254
IPR029411 RG-lyase_III 494 684
IPR029413 RG-lyase_II 408 480
No external refs found!