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  5. Brara.F00701.1

Brara.F00701.1


Description : Unknown function


Gene families : OG_42_0000128 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F00701.1
Cluster HCAA Clusters: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
A4A49_27230 No alias indole-3-acetic acid-amido synthetase gh3.6 0.02 Orthogroups_2024-Update
A4A49_36801 No alias indole-3-acetic acid-amido synthetase gh3.6 0.03 Orthogroups_2024-Update
Brara.G00820.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.03 Orthogroups_2024-Update
Glyma.11G051600 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
Glyma.12G141000 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
Kfl00006_0200 kfl00006_0200_v1.1 (q53p49|gh312_orysa : 224.0) Probable indole-3-acetic... 0.02 Orthogroups_2024-Update
Sopen07g031970 No alias GH3 auxin-responsive promoter 0.02 Orthogroups_2024-Update
Sopen10g004340 No alias GH3 auxin-responsive promoter 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Predicted GO
BP GO:0006353 DNA-templated transcription, termination IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004993 GH3 10 321
IPR004993 GH3 325 516
No external refs found!