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  5. Brara.F00751.1

Brara.F00751.1


Description : Qa-type SYP1-group component of SNARE membrane fusion complex


Gene families : OG_42_0000336 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000336_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F00751.1
Cluster HCAA Clusters: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
93442 No alias syntaxin of plants 124 0.02 Orthogroups_2024-Update
At3g52400 No alias Syntaxin-122 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVC2] 0.03 Orthogroups_2024-Update
GRMZM2G131525 No alias syntaxin of plants 111 0.02 Orthogroups_2024-Update
Glyma.11G070000 No alias syntaxin of plants 112 0.03 Orthogroups_2024-Update
HORVU4Hr1G011180.1 No alias Qa-type component *(KNOLLE) of SNARE cell-plate vesicle... 0.03 Orthogroups_2024-Update
HORVU5Hr1G026120.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.02 Orthogroups_2024-Update
LOC_Os03g52650 No alias syntaxin-related protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.006G202200 No alias syntaxin of plants 121 0.03 Orthogroups_2024-Update
Pp1s300_43V6 No alias qa-sso1 syntaxin1-syp12a-group 0.02 Orthogroups_2024-Update
Seita.9G063400.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.04 Orthogroups_2024-Update
Solyc01g056830 No alias Syntaxin (AHRD V3.3 *-* A0F0A7_NICBE) 0.05 Orthogroups_2024-Update
Sopen10g032090 No alias SNARE domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004564 beta-fructofuranosidase activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
BP GO:0007265 Ras protein signal transduction IEP Predicted GO
BP GO:0007266 Rho protein signal transduction IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006011 Syntaxin_N 30 233
IPR000727 T_SNARE_dom 235 286
No external refs found!