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  5. Brara.F00767.1

Brara.F00767.1


Description : RNA editing factor *(MORF)


Gene families : OG_42_0000510 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000510_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F00767.1
Cluster HCAA Clusters: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
At4g20020 No alias Multiple organellar RNA editing factor 1, mitochondrial... 0.03 Orthogroups_2024-Update
Bradi1g50640 No alias differentiation and greening-like 1 0.03 Orthogroups_2024-Update
Bradi3g14650 No alias plastid developmental protein DAG, putative 0.02 Orthogroups_2024-Update
Bradi3g41430 No alias cobalt ion binding 0.06 Orthogroups_2024-Update
Bradi4g22160 No alias Function unknown 0.02 Orthogroups_2024-Update
Bradi5g20660 No alias differentiation and greening-like 1 0.02 Orthogroups_2024-Update
Brara.A01086.1 No alias RNA editing factor *(MORF) 0.04 Orthogroups_2024-Update
Brara.C03552.1 No alias RNA editing factor *(MORF) 0.05 Orthogroups_2024-Update
Brara.D02132.1 No alias RNA editing factor *(MORF) 0.03 Orthogroups_2024-Update
Brara.E01050.1 No alias RNA editing factor *(MORF) 0.03 Orthogroups_2024-Update
Brara.G00411.1 No alias RNA editing factor *(MORF) 0.03 Orthogroups_2024-Update
GRMZM2G003765 No alias plastid developmental protein DAG, putative 0.04 Orthogroups_2024-Update
GRMZM2G383540 No alias plastid developmental protein DAG, putative 0.03 Orthogroups_2024-Update
GRMZM5G808811 No alias differentiation and greening-like 1 0.03 Orthogroups_2024-Update
Glyma.12G228400 No alias cobalt ion binding 0.04 Orthogroups_2024-Update
HORVU4Hr1G016440.1 No alias RNA editing factor *(MORF) 0.02 Orthogroups_2024-Update
HORVU6Hr1G002030.1 No alias RNA editing factor *(MORF) 0.03 Orthogroups_2024-Update
HORVU7Hr1G008880.2 No alias RNA editing factor *(MORF) 0.02 Orthogroups_2024-Update
HORVU7Hr1G054850.2 No alias RNA editing factor *(MORF) 0.02 Orthogroups_2024-Update
LOC_Os04g51280 No alias DAG protein, chloroplast precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_140268g0010 No alias (at1g11430 : 131.0) plastid developmental protein DAG,... 0.03 Orthogroups_2024-Update
Potri.008G169900 No alias plastid developmental protein DAG, putative 0.03 Orthogroups_2024-Update
Potri.011G112200 No alias cobalt ion binding 0.04 Orthogroups_2024-Update
Seita.4G012800.1 No alias RNA editing factor *(MORF) 0.02 Orthogroups_2024-Update
Seita.4G211100.1 No alias RNA editing factor *(MORF) 0.03 Orthogroups_2024-Update
Seita.8G095000.1 No alias RNA editing factor *(MORF) 0.04 Orthogroups_2024-Update
Sobic.006G204100.1 No alias RNA editing factor *(MORF) 0.03 Orthogroups_2024-Update
Sobic.007G034500.1 No alias RNA editing factor *(MORF) 0.05 Orthogroups_2024-Update
Sobic.010G013900.1 No alias RNA editing factor *(MORF) 0.05 Orthogroups_2024-Update
Solyc02g079210 No alias DAG protein (AHRD V3.3 *** B6SJX7_MAIZE) 0.03 Orthogroups_2024-Update
Solyc05g054960 No alias Peroxisome biogenesis protein 12 (AHRD V3.3 *** K4C2H2_SOLLC) 0.05 Orthogroups_2024-Update
Solyc06g008220 No alias DAG protein (AHRD V3.3 *** A0A0K9Q0F0_ZOSMR) 0.05 Orthogroups_2024-Update
Sopen02g024010 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen02g024540 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Sopen05g033420 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen06g003080 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen10g003300 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006553 lysine metabolic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009085 lysine biosynthetic process IEP Predicted GO
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0046451 diaminopimelate metabolic process IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!