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  5. Brara.F00849.1

Brara.F00849.1


Description : Unknown function


Gene families : OG_42_0001482 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001482_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F00849.1
Cluster HCAA Clusters: Cluster_400

Target Alias Description ECC score Gene Family Method Actions
Brara.G00854.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Potri.007G062300 No alias zinc ion binding;nucleic acid binding 0.02 Orthogroups_2024-Update
Potri.T016400 No alias zinc ion binding;nucleic acid binding 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
InterPro domains Description Start Stop
IPR025558 DUF4283 37 162
IPR025836 Zn_knuckle_CX2CX4HX4C 169 219
No external refs found!