Brara.F00864.1

Description : Unknown function

Gene families : OG_42_0000113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.F00864.1
Cluster	HCAA Clusters: Cluster_329

Target	Alias	Description	ECC score	Gene Family Method
At1g63350	No alias	Disease resistance protein (CC-NBS-LRR class) family...	0.03	Orthogroups_2024-Update
At5g43730	No alias	Probable disease resistance protein At5g43730...	0.04	Orthogroups_2024-Update
Brara.F00179.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Brara.I03376.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Brara.I05123.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
PSME_00033628-RA	No alias	(at4g27220 : 254.0) NB-ARC domain-containing disease...	0.02	Orthogroups_2024-Update
Potri.T004100	No alias	NB-ARC domain-containing disease resistance protein	0.02	Orthogroups_2024-Update
Potri.T052001	No alias	NB-ARC domain-containing disease resistance protein	0.02	Orthogroups_2024-Update
Sobic.006G146500.2	No alias	Unknown function	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	16Dec
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	16Dec
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	Predicted GO
MF	GO:0004652	polynucleotide adenylyltransferase activity	IEP	Predicted GO
MF	GO:0008168	methyltransferase activity	IEP	Predicted GO
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Predicted GO
BP	GO:0043631	RNA polyadenylation	IEP	Predicted GO
MF	GO:0070566	adenylyltransferase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	166	403
IPR001611	Leu-rich_rpt	523	584

External Links

No external refs found!