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  5. Brara.F00887.1

Brara.F00887.1


Description : calcium-permeable channel *(OSCA)


Gene families : OG_42_0000192 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000192_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F00887.1
Cluster HCAA Clusters: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
91711 No alias ERD (early-responsive to dehydration stress) family protein 0.02 Orthogroups_2024-Update
A4A49_09861 No alias csc1-like protein rxw8 0.03 Orthogroups_2024-Update
A4A49_15965 No alias csc1-like protein erd4 0.03 Orthogroups_2024-Update
A4A49_29826 No alias csc1-like protein rxw8 0.04 Orthogroups_2024-Update
Bradi2g26180 No alias ERD (early-responsive to dehydration stress) family protein 0.03 Orthogroups_2024-Update
Bradi2g39230 No alias ERD (early-responsive to dehydration stress) family protein 0.03 Orthogroups_2024-Update
Brara.A02367.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
Brara.G02874.1 No alias calcium-permeable channel *(OSCA) 0.04 Orthogroups_2024-Update
LOC_Os01g35050 No alias early-responsive to dehydration protein-related,... 0.03 Orthogroups_2024-Update
MA_10431698g0010 No alias (at1g30360 : 669.0) early-responsive to dehydration 4... 0.05 Orthogroups_2024-Update
MA_10435227g0010 No alias (at4g02900 : 534.0) ERD (early-responsive to dehydration... 0.05 Orthogroups_2024-Update
MA_317011g0010 No alias (at3g01100 : 131.0) unknown protein, has cDNAs and ESTs... 0.03 Orthogroups_2024-Update
Potri.002G226800 No alias ERD (early-responsive to dehydration stress) family protein 0.03 Orthogroups_2024-Update
Potri.004G115800 No alias hypothetical protein 1 0.03 Orthogroups_2024-Update
Pp1s127_53V6 No alias early-responsive to dehydration erd 0.03 Orthogroups_2024-Update
Seita.5G189900.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
Sobic.008G144900.2 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
Solyc06g084330 No alias ERD (early-responsive to dehydration stress) family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006308 DNA catabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0061650 ubiquitin-like protein conjugating enzyme activity IEP Predicted GO
MF GO:0061657 UFM1 conjugating enzyme activity IEP Predicted GO
MF GO:0071568 UFM1 transferase activity IEP Predicted GO
BP GO:0071569 protein ufmylation IEP Predicted GO
InterPro domains Description Start Stop
IPR032880 Csc1_N 7 179
IPR003864 RSN1_7TM 373 645
IPR027815 PHM7_cyt 200 362
No external refs found!