1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. At2g19385

At2g19385


Description : At2g19385 [Source:UniProtKB/TrEMBL;Acc:Q8S8S8]


Gene families : OG_42_0007701 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007701_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At2g19385
Cluster HCCA clusters: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
A4A49_13053 No alias ubp1-associated proteins 1c 0.02 Orthogroups_2024-Update
Seita.5G257500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.003G198300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
evm.model.tig00000383.21 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
MF GO:0000149 SNARE binding IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0000726 non-recombinational repair IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0004003 ATP-dependent DNA helicase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006302 double-strand break repair IEP Predicted GO
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006353 DNA-templated transcription, termination IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
MF GO:0008026 ATP-dependent helicase activity IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0010639 negative regulation of organelle organization IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
MF GO:0019905 syntaxin binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0033043 regulation of organelle organization IEP Predicted GO
BP GO:0033044 regulation of chromosome organization IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
CC GO:0042555 MCM complex IEP Predicted GO
BP GO:0043086 negative regulation of catalytic activity IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0044092 negative regulation of molecular function IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0051095 regulation of helicase activity IEP Predicted GO
BP GO:0051097 negative regulation of helicase activity IEP Predicted GO
BP GO:0051129 negative regulation of cellular component organization IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
BP GO:0051336 regulation of hydrolase activity IEP Predicted GO
BP GO:0051346 negative regulation of hydrolase activity IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
MF GO:0070035 purine NTP-dependent helicase activity IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
BP GO:1905462 regulation of DNA duplex unwinding IEP Predicted GO
BP GO:1905463 negative regulation of DNA duplex unwinding IEP Predicted GO
BP GO:1905774 regulation of DNA helicase activity IEP Predicted GO
BP GO:1905775 negative regulation of DNA helicase activity IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
BP GO:2001251 negative regulation of chromosome organization IEP Predicted GO
InterPro domains Description Start Stop
IPR014898 Znf_C2H2_LYAR 30 57
No external refs found!