1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.F01012.1

Brara.F01012.1


Description : pectin methylesterase inhibitor


Gene families : OG_42_0000479 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000479_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F01012.1
Cluster HCAA Clusters: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
At5g20740 No alias Plant invertase/pectin methylesterase inhibitor... 0.02 Orthogroups_2024-Update
Brara.K01401.1 No alias pectin methylesterase inhibitor 0.04 Orthogroups_2024-Update
Potri.003G113600 No alias Plant invertase/pectin methylesterase inhibitor... 0.03 Orthogroups_2024-Update
Sobic.006G004300.1 No alias pectin methylesterase inhibitor 0.04 Orthogroups_2024-Update
Solyc03g083770 No alias Plant invertase/pectin methylesterase inhibitor... 0.04 Orthogroups_2024-Update
Sopen03g023520 No alias Plant invertase/pectin methylesterase inhibitor 0.02 Orthogroups_2024-Update
Sopen03g023540 No alias Plant invertase/pectin methylesterase inhibitor 0.02 Orthogroups_2024-Update
Sopen03g023580 No alias Plant invertase/pectin methylesterase inhibitor 0.02 Orthogroups_2024-Update
Sopen08g027670 No alias Plant invertase/pectin methylesterase inhibitor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 39 192
No external refs found!