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  5. Brara.F01033.1

Brara.F01033.1


Description : subfamily ABCG transporter


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F01033.1
Cluster HCAA Clusters: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
441717 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
A4A49_10347 No alias pleiotropic drug resistance protein 1 0.04 Orthogroups_2024-Update
At1g59870 No alias ABC transporter G family member 36... 0.04 Orthogroups_2024-Update
Bradi1g38025 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.02 Orthogroups_2024-Update
Bradi3g34890 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Cre01.g007000 No alias pleiotropic drug resistance 3 0.02 Orthogroups_2024-Update
GRMZM2G143139 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.04G069800 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
Glyma.07G033500 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.17G039300 No alias pleiotropic drug resistance 9 0.03 Orthogroups_2024-Update
Glyma.18G063400 No alias pleiotropic drug resistance 3 0.03 Orthogroups_2024-Update
Glyma.19G169400 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
HORVU3Hr1G053350.8 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
HORVU3Hr1G071470.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
HORVU7Hr1G092510.2 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
LOC_Os08g43120 No alias Plant PDR ABC transporter associated domain containing... 0.02 Orthogroups_2024-Update
LOC_Os12g13720 No alias Plant PDR ABC transporter associated domain containing... 0.04 Orthogroups_2024-Update
LOC_Os12g32820 No alias pleiotropic drug resistance protein 3, putative, expressed 0.03 Orthogroups_2024-Update
MA_10426781g0010 No alias (at2g36380 : 1292.0) pleiotropic drug resistance 6... 0.05 Orthogroups_2024-Update
MA_135152g0010 No alias (q5z9s8|pdr12_orysa : 1938.0) Pleiotropic drug... 0.02 Orthogroups_2024-Update
MA_173274g0010 No alias (q5z9s8|pdr12_orysa : 429.0) Pleiotropic drug resistance... 0.02 Orthogroups_2024-Update
PSME_00000869-RA No alias (q5z9s8|pdr12_orysa : 1879.0) Pleiotropic drug... 0.06 Orthogroups_2024-Update
PSME_00001268-RA No alias (at1g59870 : 1834.0) ATP binding cassette transporter.... 0.03 Orthogroups_2024-Update
PSME_00003090-RA No alias (at1g59870 : 811.0) ATP binding cassette transporter.... 0.03 Orthogroups_2024-Update
PSME_00007073-RA No alias (q8gu88|pdr7_orysa : 1875.0) Putative pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00009192-RA No alias (q8gu88|pdr7_orysa : 1875.0) Putative pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00012870-RA No alias (q76cu2|pdr1_tobac : 1718.0) Pleiotropic drug resistance... 0.02 Orthogroups_2024-Update
PSME_00013320-RA No alias (q8gu88|pdr7_orysa : 1886.0) Putative pleiotropic drug... 0.04 Orthogroups_2024-Update
PSME_00014724-RA No alias (q76cu2|pdr1_tobac : 1860.0) Pleiotropic drug resistance... 0.06 Orthogroups_2024-Update
PSME_00015316-RA No alias (q2pcf1|pdr2_nicpl : 1867.0) Pleiotropic drug resistance... 0.02 Orthogroups_2024-Update
PSME_00015395-RA No alias (q76cu2|pdr1_tobac : 1904.0) Pleiotropic drug resistance... 0.08 Orthogroups_2024-Update
Pp1s170_10V6 No alias atp-binding cassette 0.02 Orthogroups_2024-Update
Seita.2G179600.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Seita.4G181500.1 No alias subfamily ABCG transporter 0.07 Orthogroups_2024-Update
Seita.5G221700.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Sobic.002G321300.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.003G215800.1 No alias subfamily ABCG transporter 0.05 Orthogroups_2024-Update
Sobic.003G216000.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.003G216166.1 No alias subfamily ABCG transporter 0.05 Orthogroups_2024-Update
Sobic.003G216232.1 No alias subfamily ABCG transporter 0.05 Orthogroups_2024-Update
Sopen08g021560 No alias ABC-2 type transporter 0.03 Orthogroups_2024-Update
evm.model.tig00000900.8 No alias (q7fmw4|pdr15_orysa : 352.0) Pleiotropic drug resistance... 0.01 Orthogroups_2024-Update
evm.model.tig00021489.3 No alias (at3g21090 : 172.0) ABC-2 type transporter family... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
CC GO:0005664 nuclear origin of replication recognition complex IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
InterPro domains Description Start Stop
IPR013581 PDR_assoc 286 349
IPR003439 ABC_transporter-like 409 508
IPR013525 ABC_2_trans 193 275
IPR013525 ABC_2_trans 581 793
No external refs found!