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  5. Brara.F01050.1

Brara.F01050.1


Description : cutin and suberin biosynthesis transcription factor *(SHN) & subgroup ERF-V transcription factor


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F01050.1
Cluster HCAA Clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
A4A49_03202 No alias ethylene-responsive transcription factor erf053 0.03 Orthogroups_2024-Update
A4A49_13998 No alias ethylene-responsive transcription factor 4 0.03 Orthogroups_2024-Update
A4A49_16759 No alias ethylene-responsive transcription factor erf012 0.03 Orthogroups_2024-Update
A4A49_33000 No alias ethylene-responsive transcription factor 14 0.04 Orthogroups_2024-Update
AC198403.3_FG001 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
At1g12630 No alias Ethylene-responsive transcription factor ERF027... 0.03 Orthogroups_2024-Update
At1g15360 No alias Ethylene-responsive transcription factor WIN1... 0.03 Orthogroups_2024-Update
At1g25470 No alias Ethylene-responsive transcription factor ERF116... 0.03 Orthogroups_2024-Update
At1g28360 No alias Ethylene-responsive transcription factor 12... 0.03 Orthogroups_2024-Update
At1g77200 No alias Ethylene-responsive transcription factor ERF037... 0.05 Orthogroups_2024-Update
At2g20880 No alias Ethylene-responsive transcription factor ERF053... 0.04 Orthogroups_2024-Update
At2g36450 No alias Ethylene-responsive transcription factor ERF024... 0.03 Orthogroups_2024-Update
At2g40220 No alias Ethylene-responsive transcription factor ABI4... 0.03 Orthogroups_2024-Update
At4g17500 No alias Ethylene-responsive transcription factor 1A... 0.03 Orthogroups_2024-Update
At4g25490 No alias DRE/CRT-binding factor 1 [Source:UniProtKB/TrEMBL;Acc:B6DTR3] 0.05 Orthogroups_2024-Update
At5g13910 No alias LEP [Source:UniProtKB/TrEMBL;Acc:A0A178UQP2] 0.03 Orthogroups_2024-Update
At5g51990 No alias C-repeat binding factor 4 [Source:UniProtKB/TrEMBL;Acc:B2BJ26] 0.04 Orthogroups_2024-Update
At5g65130 No alias Integrase-type DNA-binding superfamily protein... 0.03 Orthogroups_2024-Update
Bradi1g72449 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g08790 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Bradi3g24000 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Bradi5g24110 No alias related to AP2 10 0.02 Orthogroups_2024-Update
Brara.A00041.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
Brara.B02236.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.04 Orthogroups_2024-Update
Brara.E02969.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.03 Orthogroups_2024-Update
Brara.F01354.1 No alias subgroup ERF-II transcription factor *(ERF16/17/18) 0.03 Orthogroups_2024-Update
Brara.G02253.1 No alias subgroup ERF-II transcription factor *(ERF16/17/18) 0.03 Orthogroups_2024-Update
Brara.I03370.1 No alias subgroup ERF-I transcription factor 0.04 Orthogroups_2024-Update
Brara.I04175.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Brara.K00042.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G174917 No alias DREB and EAR motif protein 3 0.03 Orthogroups_2024-Update
GRMZM2G175543 No alias ethylene responsive element binding factor 4 0.03 Orthogroups_2024-Update
GRMZM5G837876 No alias ethylene-responsive element binding factor 15 0.03 Orthogroups_2024-Update
Glyma.02G080200 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.03G112000 No alias ethylene-responsive element binding factor 13 0.03 Orthogroups_2024-Update
Glyma.03G255500 No alias cytokinin response factor 4 0.03 Orthogroups_2024-Update
Glyma.07G250100 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G014800 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.13G088100 No alias related to AP2 4 0.01 Orthogroups_2024-Update
Glyma.18G252300 No alias ethylene-responsive element binding factor 13 0.03 Orthogroups_2024-Update
Glyma.19G163900 No alias ethylene response factor 1 0.03 Orthogroups_2024-Update
Glyma.19G253100 No alias cytokinin response factor 4 0.03 Orthogroups_2024-Update
HORVU4Hr1G079630.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
HORVU5Hr1G080340.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g34260 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g43970 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g54050 No alias ethylene-responsive transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g08340 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g40150 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g20350 No alias ethylene-responsive transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_100577g0010 No alias (at5g21960 : 112.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_10274g0010 No alias (at5g13330 : 108.0) encodes a member of the ERF... 0.04 Orthogroups_2024-Update
MA_1037g0020 No alias (at1g74930 : 134.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_12547g0010 No alias (at5g25810 : 85.9) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_164803g0010 No alias (at5g11590 : 119.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_175747g0010 No alias (at1g74930 : 119.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_40338g0010 No alias (at1g21910 : 84.7) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_67841g0010 No alias (at2g44940 : 151.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_900190g0010 No alias (at1g01250 : 124.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_922309g0010 No alias (at4g17500 : 92.0) Encodes a member of the ERF (ethylene... 0.04 Orthogroups_2024-Update
PSME_00004941-RA No alias (at4g17500 : 94.7) Encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
PSME_00037532-RA No alias (at5g61890 : 129.0) encodes a member of the ERF... 0.04 Orthogroups_2024-Update
PSME_00037661-RA No alias (at4g17500 : 149.0) Encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00051454-RA No alias (at1g19210 : 98.6) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00051455-RA No alias (at5g21960 : 102.0) encodes a member of the DREB... 0.04 Orthogroups_2024-Update
PSME_00056166-RA No alias (at5g11590 : 103.0) encodes a member of the DREB... 0.04 Orthogroups_2024-Update
Potri.001G397200 No alias ethylene responsive element binding factor 4 0.03 Orthogroups_2024-Update
Potri.008G091300 No alias related to AP2 11 0.03 Orthogroups_2024-Update
Potri.010G163900 No alias related to AP2 11 0.03 Orthogroups_2024-Update
Potri.013G135600 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.014G099900 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.019G088000 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Pp1s133_11V6 No alias c-repeat binding factor 4 0.03 Orthogroups_2024-Update
Pp1s138_190V6 No alias ap2 erf domain-containing transcription factor 0.01 Orthogroups_2024-Update
Pp1s14_196V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s21_247V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s23_8V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s41_212V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Seita.1G196400.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Seita.4G039700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.4G252600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G081300.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Seita.7G188500.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Seita.7G205200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G442100.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G310600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.006G167900.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Solyc01g009440 No alias C-repeat binding factor 1 (AHRD V3.3 *** A0A077B5X4_9ROSI) 0.03 Orthogroups_2024-Update
Solyc02g067020 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc03g116610 No alias Ethylene-responsive transcription factor WIN1 (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc10g080310 No alias Dehydration responsive element binding transcription... 0.04 Orthogroups_2024-Update
Sopen02g033000 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen03g005160 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen04g006170 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen04g006680 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen08g003200 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0005384 manganese ion transmembrane transporter activity IEP Predicted GO
BP GO:0006450 regulation of translational fidelity IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
MF GO:0008200 ion channel inhibitor activity IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0016247 channel regulator activity IEP Predicted GO
MF GO:0016248 channel inhibitor activity IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
MF GO:0017080 sodium channel regulator activity IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
MF GO:0019871 sodium channel inhibitor activity IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
BP GO:0030026 cellular manganese ion homeostasis IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055071 manganese ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
MF GO:0099106 ion channel regulator activity IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 6 50
No external refs found!