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At2g19660


Description : Cysteine/Histidine-rich C1 domain family protein [Source:TAIR;Acc:AT2G19660]


Gene families : OG_42_0001129 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001129_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At2g19660
Cluster HCCA clusters: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
At2g04680 No alias Cysteine/Histidine-rich C1 domain family protein... 0.04 Orthogroups_2024-Update
At2g43220 No alias Cysteine/Histidine-rich C1 domain family protein... 0.05 Orthogroups_2024-Update
At3g07000 No alias At3g07000 [Source:UniProtKB/TrEMBL;Acc:Q9M8Z9] 0.07 Orthogroups_2024-Update
At5g54040 No alias CHP-rich zinc finger protein-like... 0.03 Orthogroups_2024-Update
Brara.D01070.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR004146 DC1 484 527
IPR004146 DC1 64 107
IPR004146 DC1 290 337
IPR004146 DC1 121 166
IPR004146 DC1 238 280
IPR004146 DC1 177 224
IPR004146 DC1 372 420
IPR004146 DC1 538 586
No external refs found!