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  5. Brara.F01260.1

Brara.F01260.1


Description : HD-ZIP IV-type transcription factor


Gene families : OG_42_0000114 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F01260.1
Cluster HCAA Clusters: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
A4A49_02283 No alias homeobox-leucine zipper protein meristem l1 0.03 Orthogroups_2024-Update
At1g34650 No alias Homeobox-leucine zipper protein HDG10... 0.04 Orthogroups_2024-Update
Brara.G01663.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
Brara.G02009.1 No alias HD-ZIP IV-type transcription factor 0.04 Orthogroups_2024-Update
Glyma.01G240100 No alias protodermal factor 2 0.03 Orthogroups_2024-Update
Glyma.08G204700 No alias HD-ZIP IV family of homeobox-leucine zipper protein with... 0.03 Orthogroups_2024-Update
Glyma.15G016500 No alias HD-ZIP IV family of homeobox-leucine zipper protein with... 0.05 Orthogroups_2024-Update
HORVU2Hr1G095210.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G080700.2 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
HORVU6Hr1G079410.4 No alias HD-ZIP IV-type transcription factor 0.02 Orthogroups_2024-Update
HORVU7Hr1G035230.3 No alias HD-ZIP IV-type transcription factor 0.04 Orthogroups_2024-Update
HORVU7Hr1G073450.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os08g19590 No alias Homeobox domain containing protein, expressed 0.03 Orthogroups_2024-Update
PSME_00042191-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Pp1s209_10V6 No alias No description available 0.03 Orthogroups_2024-Update
Seita.7G203300.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
Sopen01g037400 No alias START domain 0.03 Orthogroups_2024-Update
Sopen03g005620 No alias START domain 0.04 Orthogroups_2024-Update
Sopen03g028900 No alias START domain 0.03 Orthogroups_2024-Update
Sopen10g001320 No alias START domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
MF GO:0008289 lipid binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 211 432
IPR001356 Homeobox_dom 20 71
No external refs found!