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  5. Brara.F01290.1

Brara.F01290.1


Description : transcription factor *(REVEILLE)


Gene families : OG_42_0000380 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F01290.1
Cluster HCAA Clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
78045 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
A4A49_11843 No alias protein reveille 6 0.03 Orthogroups_2024-Update
A4A49_16735 No alias protein reveille 7 0.02 Orthogroups_2024-Update
At1g01520 No alias ASG4 [Source:UniProtKB/TrEMBL;Acc:A0A178W835] 0.03 Orthogroups_2024-Update
At5g52660 No alias Protein REVEILLE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0W3] 0.03 Orthogroups_2024-Update
Brara.E01373.1 No alias transcription factor *(REVEILLE) 0.03 Orthogroups_2024-Update
Brara.E03078.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.04 Orthogroups_2024-Update
LOC_Os06g51260 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
Sobic.004G281800.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.03 Orthogroups_2024-Update
Sobic.010G223700.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.02 Orthogroups_2024-Update
Solyc10g084370 No alias MYB transcription factor (AHRD V3.3 *** B5TV64_CAMSI) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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  • Type GO Term Name Evidence Source
    MF GO:0004175 endopeptidase activity IEP Predicted GO
    MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
    MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
    MF GO:0005384 manganese ion transmembrane transporter activity IEP Predicted GO
    BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
    BP GO:0006873 cellular ion homeostasis IEP Predicted GO
    BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
    MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Predicted GO
    MF GO:0008237 metallopeptidase activity IEP Predicted GO
    BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Predicted GO
    CC GO:0009507 chloroplast IEP Predicted GO
    CC GO:0009521 photosystem IEP Predicted GO
    CC GO:0009522 photosystem I IEP Predicted GO
    CC GO:0009523 photosystem II IEP Predicted GO
    CC GO:0009536 plastid IEP Predicted GO
    CC GO:0009538 photosystem I reaction center IEP Predicted GO
    MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
    BP GO:0015979 photosynthesis IEP Predicted GO
    MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
    MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
    MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
    MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Predicted GO
    BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Predicted GO
    BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
    BP GO:0019725 cellular homeostasis IEP Predicted GO
    BP GO:0030003 cellular cation homeostasis IEP Predicted GO
    BP GO:0030026 cellular manganese ion homeostasis IEP Predicted GO
    MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
    CC GO:0044425 membrane part IEP Predicted GO
    CC GO:0044436 thylakoid part IEP Predicted GO
    BP GO:0046490 isopentenyl diphosphate metabolic process IEP Predicted GO
    MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
    BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
    BP GO:0048878 chemical homeostasis IEP Predicted GO
    BP GO:0050801 ion homeostasis IEP Predicted GO
    BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Predicted GO
    BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Predicted GO
    MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Predicted GO
    BP GO:0055065 metal ion homeostasis IEP Predicted GO
    BP GO:0055071 manganese ion homeostasis IEP Predicted GO
    BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
    BP GO:0055080 cation homeostasis IEP Predicted GO
    BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
    BP GO:0071586 CAAX-box protein processing IEP Predicted GO
    BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
    CC GO:0098796 membrane protein complex IEP Predicted GO
    InterPro domains Description Start Stop
    IPR001005 SANT/Myb 50 93
    No external refs found!