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  5. At2g19710

At2g19710


Description : Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:F4ITF9]


Gene families : OG_42_0000752 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000752_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At2g19710
Cluster HCCA clusters: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
Glyma.07G127800 No alias Regulator of Vps4 activity in the MVB pathway protein 0.03 Orthogroups_2024-Update
Glyma.16G157900 No alias Regulator of Vps4 activity in the MVB pathway protein 0.04 Orthogroups_2024-Update
Kfl00078_0060 kfl00078_0060_v1.1 (at1g34220 : 227.0) Regulator of Vps4 activity in the... 0.02 Orthogroups_2024-Update
PSME_00000891-RA No alias (at1g34220 : 225.0) Regulator of Vps4 activity in the... 0.02 Orthogroups_2024-Update
Potri.006G149800 No alias Regulator of Vps4 activity in the MVB pathway protein 0.02 Orthogroups_2024-Update
Potri.010G127000 No alias Regulator of Vps4 activity in the MVB pathway protein 0.03 Orthogroups_2024-Update
Potri.017G113900 No alias Regulator of Vps4 activity in the MVB pathway protein 0.03 Orthogroups_2024-Update
Sobic.001G118900.1 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
InterPro domains Description Start Stop
IPR005061 Ist1 15 178
No external refs found!