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Description : component *(Sm-D3) of U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex
Gene families : OG_42_0003081 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003081_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.F01466.1 | |
| Cluster | HCAA Clusters: Cluster_220 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre10.g455300 | No alias | Small nuclear ribonucleoprotein family protein | 0.02 | Orthogroups_2024-Update | |
| Potri.005G251100 | No alias | Small nuclear ribonucleoprotein family protein | 0.03 | Orthogroups_2024-Update | |
| Solyc02g062240 | No alias | Small nuclear ribonucleoprotein (AHRD V3.3 *** G7LBD3_MEDTR) | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
| CC | GO:0005750 | mitochondrial respiratory chain complex III | IEP | Predicted GO |
| BP | GO:0006122 | mitochondrial electron transport, ubiquinol to cytochrome c | IEP | Predicted GO |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006260 | DNA replication | IEP | Predicted GO |
| BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
| BP | GO:0006396 | RNA processing | IEP | Predicted GO |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
| BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
| BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Predicted GO |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Predicted GO |
| MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
| BP | GO:0022900 | electron transport chain | IEP | Predicted GO |
| BP | GO:0022904 | respiratory electron transport chain | IEP | Predicted GO |
| CC | GO:0030684 | preribosome | IEP | Predicted GO |
| CC | GO:0032040 | small-subunit processome | IEP | Predicted GO |
| BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
| MF | GO:0043138 | 3'-5' DNA helicase activity | IEP | Predicted GO |
| CC | GO:0044455 | mitochondrial membrane part | IEP | Predicted GO |
| CC | GO:0045275 | respiratory chain complex III | IEP | Predicted GO |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
| BP | GO:0055114 | oxidation-reduction process | IEP | Predicted GO |
| CC | GO:0070069 | cytochrome complex | IEP | Predicted GO |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
| CC | GO:0098798 | mitochondrial protein complex | IEP | Predicted GO |
| CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | Predicted GO |
| CC | GO:0098803 | respiratory chain complex | IEP | Predicted GO |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
| CC | GO:1990204 | oxidoreductase complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001163 | LSM_dom_euk/arc | 11 | 74 |
| No external refs found! |