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  5. Brara.F01670.1

Brara.F01670.1


Description : regulatory protein of RNA homeostasis


Gene families : OG_42_0000464 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000464_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F01670.1
Cluster HCAA Clusters: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
At3g48440 No alias Zinc finger CCCH domain-containing protein 43... 0.02 Orthogroups_2024-Update
Bradi2g09350 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.03 Orthogroups_2024-Update
Brara.D01996.1 No alias regulatory protein of RNA homeostasis 0.04 Orthogroups_2024-Update
Brara.E03281.1 No alias regulatory protein of RNA homeostasis 0.03 Orthogroups_2024-Update
HORVU5Hr1G033710.3 No alias regulatory protein of RNA homeostasis 0.03 Orthogroups_2024-Update
LOC_Os11g28270 No alias zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 0.02 Orthogroups_2024-Update
MA_10435385g0010 No alias (at5g16540 : 126.0) Encodes a zinc finger protein.; zinc... 0.03 Orthogroups_2024-Update
PSME_00023176-RA No alias (q5jlb5|zfnl2_orysa : 131.0) Zinc finger CCCH... 0.04 Orthogroups_2024-Update
Solyc06g054620 No alias Zinc finger transcription factor 43 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 369 393
IPR000571 Znf_CCCH 85 108
IPR000571 Znf_CCCH 138 157
IPR000571 Znf_CCCH 182 205
No external refs found!