Brara.F01706.1

Description : cyclic nucleotide-gated cation channel *(CNGC)

Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.F01706.1
Cluster	HCAA Clusters: Cluster_86

Target	Alias	Description	ECC score	Gene Family Method
At3g48010	No alias	Probable cyclic nucleotide-gated ion channel 16...	0.06	Orthogroups_2024-Update
Glyma.17G073500	No alias	cyclic nucleotide gated channel 5	0.03	Orthogroups_2024-Update
Sobic.002G294800.1	No alias	cyclic nucleotide-gated cation channel *(CNGC)	0.02	Orthogroups_2024-Update
Sobic.009G188800.1	No alias	cyclic nucleotide-gated cation channel *(CNGC)	0.03	Orthogroups_2024-Update
evm.model.tig00000851.5	No alias	(at1g19780 : 119.0) member of Cyclic nucleotide gated...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	IEA	16Dec
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	16Dec
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	16Dec

Type	GO Term	Name	Evidence	Source
CC	GO:0005875	microtubule associated complex	IEP	Predicted GO
BP	GO:0007017	microtubule-based process	IEP	Predicted GO
BP	GO:0010921	regulation of phosphatase activity	IEP	Predicted GO
MF	GO:0015276	ligand-gated ion channel activity	IEP	Predicted GO
BP	GO:0019220	regulation of phosphate metabolic process	IEP	Predicted GO
MF	GO:0019899	enzyme binding	IEP	Predicted GO
MF	GO:0019902	phosphatase binding	IEP	Predicted GO
MF	GO:0019903	protein phosphatase binding	IEP	Predicted GO
MF	GO:0022834	ligand-gated channel activity	IEP	Predicted GO
MF	GO:0022836	gated channel activity	IEP	Predicted GO
MF	GO:0022839	ion gated channel activity	IEP	Predicted GO
CC	GO:0030286	dynein complex	IEP	Predicted GO
BP	GO:0031399	regulation of protein modification process	IEP	Predicted GO
BP	GO:0032268	regulation of cellular protein metabolic process	IEP	Predicted GO
BP	GO:0035303	regulation of dephosphorylation	IEP	Predicted GO
BP	GO:0035304	regulation of protein dephosphorylation	IEP	Predicted GO
BP	GO:0043666	regulation of phosphoprotein phosphatase activity	IEP	Predicted GO
CC	GO:0044430	cytoskeletal part	IEP	Predicted GO
BP	GO:0050790	regulation of catalytic activity	IEP	Predicted GO
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	Predicted GO
BP	GO:0051246	regulation of protein metabolic process	IEP	Predicted GO
BP	GO:0051336	regulation of hydrolase activity	IEP	Predicted GO
BP	GO:0065009	regulation of molecular function	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000595	cNMP-bd_dom	481	569
IPR005821	Ion_trans_dom	56	385

External Links

No external refs found!