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  5. Brara.F01728.1

Brara.F01728.1


Description : subfamily ABCA transporter


Gene families : OG_42_0000851 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000851_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F01728.1
Cluster HCAA Clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
At3g47750 No alias ABC transporter A family member 4... 0.03 Orthogroups_2024-Update
Cre14.g618400 No alias ABC2 homolog 7 0.01 Orthogroups_2024-Update
Pp1s234_98V6 No alias abc transporter cholesterol phospholipid flippase 0.02 Orthogroups_2024-Update
Seita.1G039200.1 No alias subfamily ABCA transporter 0.03 Orthogroups_2024-Update
Seita.4G229700.1 No alias subfamily ABCA transporter 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0019310 inositol catabolic process IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0044275 cellular carbohydrate catabolic process IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
MF GO:0050113 inositol oxygenase activity IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 626 770
No external refs found!