1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.F01759.1

Brara.F01759.1


Description : tonoplast intrinsic protein *(TIP)


Gene families : OG_42_0000183 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F01759.1
Cluster HCAA Clusters: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
At3g16240 No alias Aquaporin TIP2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q41951] 0.03 Orthogroups_2024-Update
Brara.I04810.1 No alias tonoplast intrinsic protein *(TIP) 0.03 Orthogroups_2024-Update
LOC_Os02g44080 No alias aquaporin protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g22960 No alias aquaporin protein, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00011099-RA No alias (at2g36830 : 338.0) Encodes a tonoplast intrinsic... 0.03 Orthogroups_2024-Update
Potri.009G027200 No alias tonoplast intrinsic protein 1;3 0.03 Orthogroups_2024-Update
Potri.018G152100 No alias Aquaporin-like superfamily protein 0.03 Orthogroups_2024-Update
Sopen03g039350 No alias Major intrinsic protein 0.03 Orthogroups_2024-Update
Sopen06g024830 No alias Major intrinsic protein 0.04 Orthogroups_2024-Update
Sopen06g032050 No alias Major intrinsic protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000425 MIP 18 235
No external refs found!