1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.F01791.1

Brara.F01791.1


Description : A-class RAB GTPase


Gene families : OG_42_0000131 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F01791.1
Cluster HCAA Clusters: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
232291 No alias RAB GTPase homolog A4C 0.02 Orthogroups_2024-Update
At3g15060 No alias Ras-related protein RABA1g... 0.03 Orthogroups_2024-Update
Glyma.11G241300 No alias RAB GTPase homolog A4A 0.03 Orthogroups_2024-Update
HORVU5Hr1G114250.1 No alias A-class RAB GTPase 0.03 Orthogroups_2024-Update
LOC_Os09g35860 No alias ras-related protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_10430522g0010 No alias (at1g09630 : 356.0) Encodes a putative GTP-binding... 0.02 Orthogroups_2024-Update
Sopen12g005850 No alias Ras family 0.03 Orthogroups_2024-Update
evm.model.tig00020961.97 No alias (q39572|yptc6_chlre : 290.0) Ras-related protein YPTC6 -... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA 16Dec
MF GO:0005525 GTP binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001806 Small_GTPase 14 174
No external refs found!