1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.F01852.1

Brara.F01852.1


Description : isovaleryl-CoA-dehydrogenase & EC_1.3 oxidoreductase acting on CH-CH group of donor


Gene families : OG_42_0004600 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004600_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F01852.1
Cluster HCAA Clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Bradi2g38100 No alias isovaleryl-CoA-dehydrogenase 0.05 Orthogroups_2024-Update
Cre06.g296400 No alias isovaleryl-CoA-dehydrogenase 0.03 Orthogroups_2024-Update
Mp8g15810.1 No alias isovaleryl-CoA-dehydrogenase 0.04 Orthogroups_2024-Update
PSME_00034707-RA No alias (q9fs88|ivd1_soltu : 390.0) Isovaleryl-CoA dehydrogenase... 0.01 Orthogroups_2024-Update
Pp1s25_162V6 No alias acyl- dehydrogenase 0.02 Orthogroups_2024-Update
Seita.3G047800.1 No alias isovaleryl-CoA-dehydrogenase & EC_1.3 oxidoreductase... 0.06 Orthogroups_2024-Update
evm.model.contig_2017.13 No alias (q9fs87|ivd2_soltu : 228.0) Isovaleryl-CoA dehydrogenase... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEA 16Dec
MF GO:0050660 flavin adenine dinucleotide binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Predicted GO
MF GO:0003883 CTP synthase activity IEP Predicted GO
MF GO:0004000 adenosine deaminase activity IEP Predicted GO
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predicted GO
MF GO:0004371 glycerone kinase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006071 glycerol metabolic process IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006382 adenosine to inosine editing IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006528 asparagine metabolic process IEP Predicted GO
BP GO:0006529 asparagine biosynthetic process IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0016553 base conversion or substitution editing IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0019310 inositol catabolic process IEP Predicted GO
BP GO:0019400 alditol metabolic process IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044275 cellular carbohydrate catabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
MF GO:0050113 inositol oxygenase activity IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR009075 AcylCo_DH/oxidase_C 258 406
IPR006091 Acyl-CoA_Oxase/DH_cen-dom 151 246
IPR013786 AcylCoA_DH/ox_N 34 147
No external refs found!