1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.F01882.1

Brara.F01882.1


Description : calcium sensor *(CML)


Gene families : OG_42_0000315 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F01882.1
Cluster HCAA Clusters: Cluster_274

Target Alias Description ECC score Gene Family Method Actions
270984 No alias calmodulin 5 0.03 Orthogroups_2024-Update
A4A49_30962 No alias calmodulin-like protein 11 0.03 Orthogroups_2024-Update
At2g41110 No alias Calmodulin 2 [Source:UniProtKB/TrEMBL;Acc:F4IJ46] 0.03 Orthogroups_2024-Update
Glyma.19G121900 No alias calmodulin 5 0.04 Orthogroups_2024-Update
Potri.005G215700 No alias calmodulin-like 11 0.03 Orthogroups_2024-Update
Seita.9G114900.1 No alias calcium sensor *(CML) 0.03 Orthogroups_2024-Update
Solyc10g081170 No alias Calmodulin 2 0.03 Orthogroups_2024-Update
Sopen10g031670 No alias EF hand 0.03 Orthogroups_2024-Update
Sopen11g029910 No alias EF hand 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 91 144
IPR002048 EF_hand_dom 12 73
No external refs found!