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  5. Brara.F01931.1

Brara.F01931.1


Description : Unknown function


Gene families : OG_42_0000452 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000452_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F01931.1
Cluster HCAA Clusters: Cluster_313

Target Alias Description ECC score Gene Family Method Actions
Bradi2g26807 No alias Regulator of chromosome condensation (RCC1) family with... 0.03 Orthogroups_2024-Update
Glyma.18G044000 No alias Regulator of chromosome condensation (RCC1) family with... 0.03 Orthogroups_2024-Update
PSME_00001886-RA No alias (at5g19420 : 94.4) Regulator of chromosome condensation... 0.03 Orthogroups_2024-Update
Sobic.003G269400.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen11g024860 No alias Regulator of chromosome condensation (RCC1) repeat 0.04 Orthogroups_2024-Update
Sopen12g034380 No alias Regulator of chromosome condensation (RCC1) repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
BP GO:0006353 DNA-templated transcription, termination IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 526 574
IPR000408 Reg_chr_condens 306 354
IPR000408 Reg_chr_condens 408 457
IPR000408 Reg_chr_condens 474 522
IPR000408 Reg_chr_condens 578 626
IPR013591 Brevis_radix_dom 937 991
IPR001849 PH_domain 17 123
IPR000306 Znf_FYVE 636 695
No external refs found!