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  5. Brara.F02058.1

Brara.F02058.1


Description : accessory component *(ATG13) of ATG1-13 autophagosome assembly control complex


Gene families : OG_42_0001992 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001992_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F02058.1
Cluster HCAA Clusters: Cluster_308

Target Alias Description ECC score Gene Family Method Actions
PSME_00016223-RA No alias (at3g18770 : 143.0) Autophagy-related protein 13;... 0.02 Orthogroups_2024-Update
Potri.012G004400 No alias Autophagy-related protein 13 0.03 Orthogroups_2024-Update
Seita.1G252500.1 No alias accessory component *(ATG13) of ATG1-13 autophagosome... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006914 autophagy IEA 16Dec
CC GO:1990316 Atg1/ULK1 kinase complex IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0006658 phosphatidylserine metabolic process IEP Predicted GO
BP GO:0006659 phosphatidylserine biosynthetic process IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR018731 Atg13_N 95 208
IPR018731 Atg13_N 20 91
No external refs found!