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  5. Brara.F02072.1

Brara.F02072.1


Description : EC_3.1 hydrolase acting on ester bond & pectin methylesterase


Gene families : OG_42_0000066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F02072.1
Cluster HCAA Clusters: Cluster_273

Target Alias Description ECC score Gene Family Method Actions
A4A49_03834 No alias putative pectinesterasepectinesterase inhibitor 61 0.03 Orthogroups_2024-Update
A4A49_40779 No alias putative pectinesterasepectinesterase inhibitor 34 0.04 Orthogroups_2024-Update
At1g11580 No alias methylesterase PCR A [Source:TAIR;Acc:AT1G11580] 0.03 Orthogroups_2024-Update
At3g06830 No alias Probable pectinesterase/pectinesterase inhibitor 23... 0.04 Orthogroups_2024-Update
Brara.F01763.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.04 Orthogroups_2024-Update
Glyma.06G128500 No alias pectin methylesterase PCR fragment F 0.03 Orthogroups_2024-Update
Glyma.09G077100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Glyma.15G183700 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Glyma.15G184400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.05 Orthogroups_2024-Update
Glyma.20G237800 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
MA_2253g0010 No alias (at5g53370 : 385.0) pectin methylesterase PCR fragment F... 0.03 Orthogroups_2024-Update
PSME_00048380-RA No alias (at4g02330 : 476.0) ATPMEPCRB; FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
PSME_00056054-RA No alias (at4g02330 : 471.0) ATPMEPCRB; FUNCTIONS IN:... 0.04 Orthogroups_2024-Update
Potri.001G162500 No alias pectin methylesterase 3 0.03 Orthogroups_2024-Update
Potri.001G162600 No alias pectin methylesterase 3 0.03 Orthogroups_2024-Update
Potri.002G202500 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Potri.003G072800 No alias pectin methylesterase 3 0.05 Orthogroups_2024-Update
Potri.006G134700 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Potri.015G127700 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Pp1s258_34V6 No alias Pectinesterase-2 precursor (Pectin methylesterase) (PE)... 0.03 Orthogroups_2024-Update
Solyc02g080210 No alias Pectinesterase (AHRD V3.3 *** K4B9P2_SOLLC) 0.03 Orthogroups_2024-Update
Sopen03g023110 No alias Pectinesterase 0.03 Orthogroups_2024-Update
Sopen07g006400 No alias Pectinesterase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA 16Dec
MF GO:0030599 pectinesterase activity IEA 16Dec
BP GO:0042545 cell wall modification IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0004564 beta-fructofuranosidase activity IEP Predicted GO
MF GO:0004779 sulfate adenylyltransferase activity IEP Predicted GO
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 276 574
IPR006501 Pectinesterase_inhib_dom 77 223
No external refs found!