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  5. Brara.F02111.1

Brara.F02111.1


Description : E3 ubiquitin ligase


Gene families : OG_42_0000370 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brassica rapa: Brara.F02111.1
Cluster HCAA Clusters: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Brara.F00952.1 No alias E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Brara.I00126.1 No alias E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Glyma.09G250001 No alias RING/FYVE/PHD zinc finger superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G059660.2 No alias E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
HORVU1Hr1G083720.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU3Hr1G063680.11 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
MA_10435273g0010 No alias (at5g62460 : 229.0) RING/FYVE/PHD zinc finger... 0.03 Orthogroups_2024-Update
Seita.5G026700.1 No alias E3 ubiquitin ligase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0008285 negative regulation of cell proliferation IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0042127 regulation of cell proliferation IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR022143 DUF3675 124 243
IPR011016 Znf_RING-CH 73 118
No external refs found!