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  5. Brara.F02112.1

Brara.F02112.1


Description : Unknown function


Gene families : OG_42_0000225 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000225_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F02112.1
Cluster HCAA Clusters: Cluster_398

Target Alias Description ECC score Gene Family Method Actions
Brara.A01127.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I02412.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.03G093900 No alias BED zinc finger ;hAT family dimerisation domain 0.05 Orthogroups_2024-Update
Glyma.07G138700 No alias BED zinc finger ;hAT family dimerisation domain 0.02 Orthogroups_2024-Update
Glyma.09G099400 No alias BED zinc finger ;hAT family dimerisation domain 0.03 Orthogroups_2024-Update
Glyma.17G167500 No alias BED zinc finger ;hAT family dimerisation domain 0.02 Orthogroups_2024-Update
LOC_Os06g10740 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
Sopen05g021350 No alias hAT family C-terminal dimerisation region 0.02 Orthogroups_2024-Update
Sopen10g030700 No alias Domain of unknown function (DUF4413) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR008906 HATC_C_dom 548 614
IPR025525 hAT-like_transposase_RNase-H 407 506
No external refs found!