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  5. Brara.F02306.1

Brara.F02306.1


Description : component *(SF3B1) of splicing factor 3B complex


Gene families : OG_42_0001775 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001775_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F02306.1
Cluster HCAA Clusters: Cluster_323

Target Alias Description ECC score Gene Family Method Actions
Cre12.g494100 No alias splicing factor, putative 0.02 Orthogroups_2024-Update
PSME_00043935-RA No alias (at5g64270 : 308.0) splicing factor, putative; FUNCTIONS... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
BP GO:0008285 negative regulation of cell proliferation IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030515 snoRNA binding IEP Predicted GO
BP GO:0042127 regulation of cell proliferation IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR015016 SF3b_su1 262 386
No external refs found!