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  5. Brara.F02337.1

Brara.F02337.1


Description : component *(CAF1b/FAS2) of CAF1 histone chaperone complex


Gene families : OG_42_0007283 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007283_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F02337.1
Cluster HCAA Clusters: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
Glyma.05G190800 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Kfl00109_0210 kfl00109_0210_v1.1 (at5g64630 : 397.0) Chromatin Assembly Factor-1 (CAF-1)... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
CC GO:0000152 nuclear ubiquitin ligase complex IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
CC GO:0005680 anaphase-promoting complex IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 57 92
IPR001680 WD40_repeat 106 140
IPR001680 WD40_repeat 11 40
IPR001680 WD40_repeat 148 181
No external refs found!