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  5. At2g20750

At2g20750


Description : Expansin-B1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKU2]


Gene families : OG_42_0000145 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000145_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At2g20750
Cluster HCCA clusters: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
A4A49_24520 No alias expansin-b15 0.01 Orthogroups_2024-Update
Bradi2g35007 No alias expansin B2 0.03 Orthogroups_2024-Update
Bradi3g50740 No alias expansin B2 0.03 Orthogroups_2024-Update
Brara.A01798.1 No alias beta-class expansin 0.05 Orthogroups_2024-Update
Glyma.13G298100 No alias expansin B3 0.03 Orthogroups_2024-Update
HORVU4Hr1G088080.4 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_78155g0010 No alias (q7x6j9|exb17_orysa : 256.0) Expansin-B17 precursor... 0.02 Orthogroups_2024-Update
PSME_00003968-RA No alias (q7x6j9|exb17_orysa : 259.0) Expansin-B17 precursor... 0.03 Orthogroups_2024-Update
PSME_00005304-RA No alias (q6h676|exb11_orysa : 186.0) Expansin-B11 precursor... 0.04 Orthogroups_2024-Update
PSME_00024925-RA No alias (q7x6j9|exb17_orysa : 300.0) Expansin-B17 precursor... 0.03 Orthogroups_2024-Update
PSME_00037216-RA No alias (at2g20750 : 216.0) member of BETA-EXPANSINS. Naming... 0.02 Orthogroups_2024-Update
Potri.019G101900 No alias expansin B3 0.04 Orthogroups_2024-Update
Pp1s251_59V6 No alias beta-expansin 3 0.02 Orthogroups_2024-Update
Seita.2G122800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G327000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G327100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G301300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G301500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G301600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G542100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen10g004260 No alias Pollen allergen 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 78 150
IPR007117 Expansin_CBD 171 252
No external refs found!