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  5. Brara.F02486.1

Brara.F02486.1


Description : PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone methylation complex


Gene families : OG_42_0001253 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001253_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F02486.1
Cluster HCAA Clusters: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
Brara.A00723.1 No alias PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.04 Orthogroups_2024-Update
Glyma.07G089000 No alias Fibronectin type III domain-containing protein 0.04 Orthogroups_2024-Update
PSME_00044254-RA No alias (at4g30200 : 385.0) Encodes a protein with similarity to... 0.03 Orthogroups_2024-Update
Seita.1G086600.1 No alias PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.03 Orthogroups_2024-Update
Sobic.008G115000.1 No alias PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004860 protein kinase inhibitor activity IEP Predicted GO
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019210 kinase inhibitor activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR032881 Oberon_PHD 140 256
No external refs found!