Description : mTERF-type transcription factor
Gene families : OG_42_0000078 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000078_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.F02617.1 | |
Cluster | HCAA Clusters: Cluster_181 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_32874 | No alias | transcription termination factor mterf2, chloroplastic | 0.04 | Orthogroups_2024-Update | |
At1g62150 | No alias | Mitochondrial transcription termination factor family... | 0.04 | Orthogroups_2024-Update | |
Bradi1g45338 | No alias | Mitochondrial transcription termination factor family protein | 0.03 | Orthogroups_2024-Update | |
HORVU2Hr1G024310.1 | No alias | mTERF-type transcription factor | 0.03 | Orthogroups_2024-Update | |
HORVU7Hr1G037560.1 | No alias | mTERF-type transcription factor | 0.03 | Orthogroups_2024-Update | |
Potri.003G190700 | No alias | Mitochondrial transcription termination factor family protein | 0.02 | Orthogroups_2024-Update | |
Sobic.004G305100.1 | No alias | mTERF-type transcription factor | 0.06 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003690 | double-stranded DNA binding | IEA | 16Dec |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000154 | rRNA modification | IEP | Predicted GO |
BP | GO:0000469 | cleavage involved in rRNA processing | IEP | Predicted GO |
BP | GO:0001510 | RNA methylation | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
MF | GO:0008168 | methyltransferase activity | IEP | Predicted GO |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
MF | GO:0008649 | rRNA methyltransferase activity | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
CC | GO:0016469 | proton-transporting two-sector ATPase complex | IEP | Predicted GO |
CC | GO:0016471 | vacuolar proton-transporting V-type ATPase complex | IEP | Predicted GO |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Predicted GO |
CC | GO:0030684 | preribosome | IEP | Predicted GO |
BP | GO:0031167 | rRNA methylation | IEP | Predicted GO |
MF | GO:0031267 | small GTPase binding | IEP | Predicted GO |
CC | GO:0032040 | small-subunit processome | IEP | Predicted GO |
CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
CC | GO:0033176 | proton-transporting V-type ATPase complex | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
MF | GO:0036442 | proton-exporting ATPase activity | IEP | Predicted GO |
BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
BP | GO:0042255 | ribosome assembly | IEP | Predicted GO |
BP | GO:0042256 | mature ribosome assembly | IEP | Predicted GO |
MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Predicted GO |
MF | GO:0043022 | ribosome binding | IEP | Predicted GO |
BP | GO:0043414 | macromolecule methylation | IEP | Predicted GO |
BP | GO:0044085 | cellular component biogenesis | IEP | Predicted GO |
CC | GO:0044437 | vacuolar part | IEP | Predicted GO |
MF | GO:0044877 | protein-containing complex binding | IEP | Predicted GO |
MF | GO:0046961 | proton-transporting ATPase activity, rotational mechanism | IEP | Predicted GO |
MF | GO:0070037 | rRNA (pseudouridine) methyltransferase activity | IEP | Predicted GO |
BP | GO:0070475 | rRNA base methylation | IEP | Predicted GO |
BP | GO:0070925 | organelle assembly | IEP | Predicted GO |
BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
BP | GO:0090305 | nucleic acid phosphodiester bond hydrolysis | IEP | Predicted GO |
BP | GO:0090501 | RNA phosphodiester bond hydrolysis | IEP | Predicted GO |
MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Predicted GO |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003690 | MTERF | 94 | 423 |
No external refs found! |