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  5. Brara.F02651.1

Brara.F02651.1


Description : Unknown function


Gene families : OG_42_0000437 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000437_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F02651.1
Cluster HCAA Clusters: Cluster_221

Target Alias Description ECC score Gene Family Method Actions
A4A49_37297 No alias compass-like h3k4 histone methylase component wdr5a 0.03 Orthogroups_2024-Update
A4A49_40501 No alias compass-like h3k4 histone methylase component wdr5a 0.03 Orthogroups_2024-Update
GRMZM2G017815 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G026300 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Kfl00446_0050 kfl00446_0050_v1.... (at5g54200 : 291.0) Transducin/WD40 repeat-like... 0.02 Orthogroups_2024-Update
LOC_Os07g49090 No alias WD-40 repeat family protein, putative, expressed 0.03 Orthogroups_2024-Update
Pp1s219_28V6 No alias MJK13.13; WD-40 repeat family protein [Arabidopsis thaliana] 0.04 Orthogroups_2024-Update
Seita.7G094600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.006G182500.2 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc07g063330 No alias WD-repeat protein, putative (AHRD V3.3 *** B9T7M5_RICCO) 0.03 Orthogroups_2024-Update
Solyc08g082900 No alias WD-repeat protein, putative (AHRD V3.3 *** B9RYR0_RICCO) 0.03 Orthogroups_2024-Update
Solyc09g010720 No alias Transducin/WD-like repeat-protein (AHRD V3.3 *** G7L3F0_MEDTR) 0.05 Orthogroups_2024-Update
Sopen07g031500 No alias WD domain, G-beta repeat 0.04 Orthogroups_2024-Update
Sopen08g031130 No alias WD domain, G-beta repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 358 395
IPR001680 WD40_repeat 490 529
IPR001680 WD40_repeat 317 352
IPR001680 WD40_repeat 216 248
No external refs found!