Brara.F02666.1

Description : circadian clock time-of-day-dependent expressed repressor *(PRR)

Gene families : OG_42_0001360 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001360_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.F02666.1
Cluster	HCAA Clusters: Cluster_5

Target	Alias	Description	ECC score	Gene Family Method
A4A49_08680	No alias	two-component response regulator-like aprr7	0.02	Orthogroups_2024-Update
A4A49_21743	No alias	two-component response regulator-like aprr5	0.06	Orthogroups_2024-Update
A4A49_22842	No alias	two-component response regulator-like prr37	0.03	Orthogroups_2024-Update
At5g24470	No alias	Two-component response regulator-like APRR5...	0.07	Orthogroups_2024-Update
At5g60100	No alias	Pseudo-response regulator 3 [Source:UniProtKB/TrEMBL;Acc:F4JXG7]	0.05	Orthogroups_2024-Update
Bradi4g36077	No alias	pseudo-response regulator 5	0.03	Orthogroups_2024-Update
Brara.J02854.1	No alias	circadian clock time-of-day-dependent expressed repressor *(PRR)	0.03	Orthogroups_2024-Update
GRMZM2G005732	No alias	pseudo-response regulator 7	0.03	Orthogroups_2024-Update
Glyma.03G261300	No alias	pseudo-response regulator 5	0.03	Orthogroups_2024-Update
Glyma.04G228300	No alias	pseudo-response regulator 5	0.03	Orthogroups_2024-Update
HORVU4Hr1G021010.2	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU5Hr1G081620.1	No alias	circadian clock time-of-day-dependent expressed repressor *(PRR)	0.04	Orthogroups_2024-Update
MA_124244g0020	No alias	(q689g8\|prr37_orysa : 376.0) Two-component response...	0.04	Orthogroups_2024-Update
Pp1s412_23V6	No alias	pseudo response regulator	0.02	Orthogroups_2024-Update
Pp1s81_144V6	No alias	sensory transduction histidine	0.03	Orthogroups_2024-Update
Solyc03g081240	No alias	Two-component response regulator-like protein (AHRD V3.3...	0.04	Orthogroups_2024-Update
Solyc04g049670	No alias	Pseudo-response regulator (AHRD V3.3 *** X5I0R0_IPONI)	0.03	Orthogroups_2024-Update
Solyc10g086000	No alias	Pseudo-response regulator (AHRD V3.3 - X5I0R0_IPONI)	0.04	Orthogroups_2024-Update
Sopen03g021970	No alias	Response regulator receiver domain	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEA	16Dec
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	16Dec
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0004096	catalase activity	IEP	Predicted GO
MF	GO:0004857	enzyme inhibitor activity	IEP	Predicted GO
MF	GO:0005215	transporter activity	IEP	Predicted GO
CC	GO:0005875	microtubule associated complex	IEP	Predicted GO
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Predicted GO
BP	GO:0006811	ion transport	IEP	Predicted GO
BP	GO:0006812	cation transport	IEP	Predicted GO
BP	GO:0006835	dicarboxylic acid transport	IEP	Predicted GO
MF	GO:0008113	peptide-methionine (S)-S-oxide reductase activity	IEP	Predicted GO
MF	GO:0008324	cation transmembrane transporter activity	IEP	Predicted GO
BP	GO:0009889	regulation of biosynthetic process	IEP	Predicted GO
BP	GO:0010468	regulation of gene expression	IEP	Predicted GO
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:0015740	C4-dicarboxylate transport	IEP	Predicted GO
BP	GO:0015743	malate transport	IEP	Predicted GO
MF	GO:0016157	sucrose synthase activity	IEP	Predicted GO
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Predicted GO
MF	GO:0022857	transmembrane transporter activity	IEP	Predicted GO
CC	GO:0030286	dynein complex	IEP	Predicted GO
BP	GO:0031323	regulation of cellular metabolic process	IEP	Predicted GO
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Predicted GO
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0051252	regulation of RNA metabolic process	IEP	Predicted GO
BP	GO:0055085	transmembrane transport	IEP	Predicted GO
BP	GO:0080090	regulation of primary metabolic process	IEP	Predicted GO
MF	GO:0140110	transcription regulator activity	IEP	Predicted GO
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Predicted GO
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR010402	CCT_domain	508	550
IPR001789	Sig_transdc_resp-reg_receiver	56	167

External Links

No external refs found!

Brara.F02666.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation