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  5. Brara.F02747.1

Brara.F02747.1


Description : regulatory protein *(BDR) involved in RNA polymerase-II transcription


Gene families : OG_42_0003145 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003145_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F02747.1
Cluster HCAA Clusters: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g11780 No alias transcription factor S-II, central domain containing... 0.02 Orthogroups_2024-Update
Pp1s224_9V6 No alias transcription elongation factor-related 0.03 Orthogroups_2024-Update
Seita.1G040600.1 No alias regulatory protein *(BDR) involved in RNA polymerase-II... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006351 transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR012921 SPOC_C 703 850
IPR003618 TFIIS_cen_dom 425 512
No external refs found!