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  5. Brara.F02756.1

Brara.F02756.1


Description : component *(eIF3l) of eIF3 mRNA-to-PIC binding complex


Gene families : OG_42_0004802 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004802_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F02756.1
Cluster HCAA Clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Cre17.g697450 No alias RNA polymerase I-associated factor PAF67 0.01 Orthogroups_2024-Update
Glyma.04G080800 No alias RNA polymerase I-associated factor PAF67 0.03 Orthogroups_2024-Update
HORVU3Hr1G031330.1 No alias component *(eIF3l) of eIF3 mRNA-to-PIC binding complex 0.03 Orthogroups_2024-Update
Kfl00812_0040 kfl00812_0040_v1.1 (at5g25757 : 660.0) RNA polymerase I-associated factor... 0.02 Orthogroups_2024-Update
Sobic.003G008600.1 No alias component *(eIF3l) of eIF3 mRNA-to-PIC binding complex 0.03 Orthogroups_2024-Update
Solyc08g068340 No alias Eukaryotic translation initiation factor 3 subunit L... 0.08 Orthogroups_2024-Update
Sopen08g022190 No alias RNA polymerase I-associated factor PAF67 0.08 Orthogroups_2024-Update
evm.model.contig_2044.8 No alias (at5g25757 : 381.0) RNA polymerase I-associated factor... 0.04 Orthogroups_2024-Update
evm.model.tig00022075.15 No alias (at5g25757 : 366.0) RNA polymerase I-associated factor... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA 16Dec
CC GO:0005737 cytoplasm IEA 16Dec
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001181 RNA polymerase I general transcription initiation factor activity IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006361 transcription initiation from RNA polymerase I promoter IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006665 sphingolipid metabolic process IEP Predicted GO
BP GO:0006672 ceramide metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0140223 general transcription initiation factor activity IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR019382 eIF3l 114 509
No external refs found!