Description : histone *(H2A)
Gene families : OG_42_0000138 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000138_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.F02852.1 | |
Cluster | HCAA Clusters: Cluster_84 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
170948 | No alias | Histone superfamily protein | 0.05 | Orthogroups_2024-Update | |
A4A49_29055 | No alias | putative histone h2a.4 | 0.07 | Orthogroups_2024-Update | |
At1g54690 | No alias | Probable histone H2AXb [Source:UniProtKB/Swiss-Prot;Acc:Q9S9K7] | 0.03 | Orthogroups_2024-Update | |
At3g20670 | No alias | Probable histone H2A.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHQ5] | 0.03 | Orthogroups_2024-Update | |
At5g27670 | No alias | Histone H2A [Source:UniProtKB/TrEMBL;Acc:A0A178UFF2] | 0.04 | Orthogroups_2024-Update | |
At5g59870 | No alias | Probable histone H2A.7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJE8] | 0.07 | Orthogroups_2024-Update | |
Bradi4g06010 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Cre06.g264950 | No alias | histone H2A 10 | 0.01 | Orthogroups_2024-Update | |
Cre06.g265350 | No alias | histone H2A 10 | 0.04 | Orthogroups_2024-Update | |
Cre06.g268050 | No alias | histone H2A 10 | 0.03 | Orthogroups_2024-Update | |
Cre06.g268300 | No alias | histone H2A 10 | 0.01 | Orthogroups_2024-Update | |
Cre06.g273900 | No alias | histone H2A 10 | 0.02 | Orthogroups_2024-Update | |
Cre06.g274200 | No alias | histone H2A 10 | 0.01 | Orthogroups_2024-Update | |
Cre06.g274800 | No alias | histone H2A 10 | 0.01 | Orthogroups_2024-Update | |
Cre06.g275850 | No alias | histone H2A 10 | 0.03 | Orthogroups_2024-Update | |
Cre12.g504750 | No alias | histone H2A 10 | 0.02 | Orthogroups_2024-Update | |
Cre12.g506250 | No alias | histone H2A 10 | 0.01 | Orthogroups_2024-Update | |
Cre13.g570100 | No alias | histone H2A 10 | 0.02 | Orthogroups_2024-Update | |
Cre17.g708550 | No alias | histone H2A 10 | 0.04 | Orthogroups_2024-Update | |
Cre17.g709200 | No alias | histone H2A 10 | 0.02 | Orthogroups_2024-Update | |
Cre17.g711700 | No alias | histone H2A 10 | 0.04 | Orthogroups_2024-Update | |
Cre17.g713400 | No alias | histone H2A 10 | 0.03 | Orthogroups_2024-Update | |
GRMZM2G041381 | No alias | histone H2A 2 | 0.03 | Orthogroups_2024-Update | |
GRMZM2G151726 | No alias | histone H2A 2 | 0.03 | Orthogroups_2024-Update | |
Glyma.03G148100 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.03G241800 | No alias | gamma histone variant H2AX | 0.06 | Orthogroups_2024-Update | |
Glyma.12G215500 | No alias | histone H2A 10 | 0.02 | Orthogroups_2024-Update | |
Glyma.13G286000 | No alias | histone H2A 10 | 0.04 | Orthogroups_2024-Update | |
Glyma.13G333800 | No alias | histone H2A 12 | 0.03 | Orthogroups_2024-Update | |
Glyma.13G333900 | No alias | histone H2A 12 | 0.04 | Orthogroups_2024-Update | |
Glyma.13G334300 | No alias | histone H2A 12 | 0.06 | Orthogroups_2024-Update | |
Glyma.15G040200 | No alias | histone H2A 12 | 0.04 | Orthogroups_2024-Update | |
Glyma.15G040300 | No alias | histone H2A 12 | 0.04 | Orthogroups_2024-Update | |
Glyma.15G040400 | No alias | histone H2A 12 | 0.04 | Orthogroups_2024-Update | |
Glyma.19G151400 | No alias | gamma histone variant H2AX | 0.05 | Orthogroups_2024-Update | |
Glyma.19G234100 | No alias | histone H2A 7 | 0.06 | Orthogroups_2024-Update | |
HORVU5Hr1G026650.2 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
HORVU6Hr1G006140.1 | No alias | histone *(H2A) | 0.02 | Orthogroups_2024-Update | |
HORVU6Hr1G009020.1 | No alias | histone *(H2A) | 0.02 | Orthogroups_2024-Update | |
HORVU6Hr1G011490.2 | No alias | histone *(H2A) | 0.02 | Orthogroups_2024-Update | |
HORVU6Hr1G021160.1 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
HORVU6Hr1G021260.2 | No alias | histone *(H2A) | 0.02 | Orthogroups_2024-Update | |
HORVU7Hr1G100100.3 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
HORVU7Hr1G100110.4 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
HORVU7Hr1G100120.13 | No alias | histone *(H2A) | 0.04 | Orthogroups_2024-Update | |
HORVU7Hr1G100400.2 | No alias | histone *(H2A) | 0.02 | Orthogroups_2024-Update | |
Kfl00099_g21 | kfl00099_g21_v1.1 | (q2qpg9|h2axb_orysa : 166.0) Probable histone H2AXb -... | 0.03 | Orthogroups_2024-Update | |
Kfl00125_0190 | kfl00125_0190_v1.1 | (p50567|h2a_chlre : 169.0) Histone H2A - Chlamydomonas... | 0.02 | Orthogroups_2024-Update | |
LOC_Os03g17100 | No alias | Core histone H2A/H2B/H3/H4 domain containing protein,... | 0.02 | Orthogroups_2024-Update | |
LOC_Os05g02300 | No alias | Core histone H2A/H2B/H3/H4 domain containing protein,... | 0.04 | Orthogroups_2024-Update | |
MA_213048g0010 | No alias | (p50567|h2a_chlre : 115.0) Histone H2A - Chlamydomonas... | 0.04 | Orthogroups_2024-Update | |
MA_22203g0020 | No alias | (at5g54640 : 145.0) Isolated from T-DNA insertion line,... | 0.04 | Orthogroups_2024-Update | |
MA_962778g0010 | No alias | (q2hu68|h2a1_medtr : 184.0) Probable histone H2A.1 -... | 0.06 | Orthogroups_2024-Update | |
Mp3g00840.1 | No alias | histone (H2A) | 0.02 | Orthogroups_2024-Update | |
Mp3g02370.1 | No alias | histone (H2A) | 0.02 | Orthogroups_2024-Update | |
Potri.005G040700 | No alias | gamma histone variant H2AX | 0.04 | Orthogroups_2024-Update | |
Potri.013G028800 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Seita.2G287100.1 | No alias | histone *(H2A) | 0.04 | Orthogroups_2024-Update | |
Seita.3G063000.1 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
Seita.5G370600.1 | No alias | histone *(H2A) | 0.04 | Orthogroups_2024-Update | |
Seita.5G370700.1 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
Seita.9G450000.1 | No alias | histone *(H2A) | 0.02 | Orthogroups_2024-Update | |
Sobic.001G416800.1 | No alias | histone *(H2A) | 0.04 | Orthogroups_2024-Update | |
Solyc01g099410 | No alias | Histone H2A (AHRD V3.3 *** G8IIJ5_SOLLC) | 0.09 | Orthogroups_2024-Update | |
Solyc09g010400 | No alias | Histone H2A (AHRD V3.3 *** K4CR67_SOLLC) | 0.03 | Orthogroups_2024-Update | |
Solyc09g074300 | No alias | Histone H2A (AHRD V3.3 *** K4CV07_SOLLC) | 0.08 | Orthogroups_2024-Update | |
Solyc09g082710 | No alias | Histone H2A (AHRD V3.3 *** K4CVP7_SOLLC) | 0.07 | Orthogroups_2024-Update | |
Solyc10g006560 | No alias | Histone H2A (AHRD V3.3 *** A0A0V0H7M3_SOLCH) | 0.06 | Orthogroups_2024-Update | |
Solyc11g073250 | No alias | Histone H2A (AHRD V3.3 *** K4DB31_SOLLC) | 0.05 | Orthogroups_2024-Update | |
Solyc11g073260 | No alias | Histone H2A (AHRD V3.3 *** K4DB32_SOLLC) | 0.05 | Orthogroups_2024-Update | |
Solyc12g005270 | No alias | Histone H2A (AHRD V3.3 *** K4DB65_SOLLC) | 0.07 | Orthogroups_2024-Update | |
Sopen01g042970 | No alias | Core histone H2A/H2B/H3/H4 | 0.03 | Orthogroups_2024-Update | |
Sopen06g035820 | No alias | Core histone H2A/H2B/H3/H4 | 0.03 | Orthogroups_2024-Update | |
Sopen09g005140 | No alias | Core histone H2A/H2B/H3/H4 | 0.04 | Orthogroups_2024-Update | |
Sopen09g029130 | No alias | Core histone H2A/H2B/H3/H4 | 0.04 | Orthogroups_2024-Update | |
Sopen09g031570 | No alias | Core histone H2A/H2B/H3/H4 | 0.04 | Orthogroups_2024-Update | |
Sopen10g002510 | No alias | Core histone H2A/H2B/H3/H4 | 0.05 | Orthogroups_2024-Update | |
Sopen11g030880 | No alias | Core histone H2A/H2B/H3/H4 | 0.03 | Orthogroups_2024-Update | |
Sopen11g030890 | No alias | Core histone H2A/H2B/H3/H4 | 0.03 | Orthogroups_2024-Update | |
evm.model.contig_533.4 | No alias | (p16866|h2a4_volca : 182.0) Histone H2A-IV - Volvox... | 0.03 | Orthogroups_2024-Update | |
evm.model.tig00001085.4 | No alias | (p16866|h2a4_volca : 154.0) Histone H2A-IV - Volvox... | 0.01 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Predicted GO |
MF | GO:0003872 | 6-phosphofructokinase activity | IEP | Predicted GO |
MF | GO:0004478 | methionine adenosyltransferase activity | IEP | Predicted GO |
MF | GO:0005507 | copper ion binding | IEP | Predicted GO |
MF | GO:0005509 | calcium ion binding | IEP | Predicted GO |
MF | GO:0005525 | GTP binding | IEP | Predicted GO |
CC | GO:0005743 | mitochondrial inner membrane | IEP | Predicted GO |
CC | GO:0005839 | proteasome core complex | IEP | Predicted GO |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | Predicted GO |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | Predicted GO |
BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | Predicted GO |
BP | GO:0006732 | coenzyme metabolic process | IEP | Predicted GO |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Predicted GO |
BP | GO:0006754 | ATP biosynthetic process | IEP | Predicted GO |
BP | GO:0006839 | mitochondrial transport | IEP | Predicted GO |
BP | GO:0006848 | pyruvate transport | IEP | Predicted GO |
BP | GO:0006850 | mitochondrial pyruvate transmembrane transport | IEP | Predicted GO |
BP | GO:0006886 | intracellular protein transport | IEP | Predicted GO |
MF | GO:0008443 | phosphofructokinase activity | IEP | Predicted GO |
BP | GO:0009108 | coenzyme biosynthetic process | IEP | Predicted GO |
BP | GO:0009117 | nucleotide metabolic process | IEP | Predicted GO |
BP | GO:0009123 | nucleoside monophosphate metabolic process | IEP | Predicted GO |
BP | GO:0009124 | nucleoside monophosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009126 | purine nucleoside monophosphate metabolic process | IEP | Predicted GO |
BP | GO:0009127 | purine nucleoside monophosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | Predicted GO |
BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | Predicted GO |
BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | Predicted GO |
BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | Predicted GO |
BP | GO:0009156 | ribonucleoside monophosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009161 | ribonucleoside monophosphate metabolic process | IEP | Predicted GO |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | Predicted GO |
BP | GO:0009167 | purine ribonucleoside monophosphate metabolic process | IEP | Predicted GO |
BP | GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | Predicted GO |
BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | Predicted GO |
BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | Predicted GO |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | Predicted GO |
BP | GO:0015718 | monocarboxylic acid transport | IEP | Predicted GO |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Predicted GO |
MF | GO:0016859 | cis-trans isomerase activity | IEP | Predicted GO |
BP | GO:0017144 | drug metabolic process | IEP | Predicted GO |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
MF | GO:0019200 | carbohydrate kinase activity | IEP | Predicted GO |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | Predicted GO |
CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Predicted GO |
CC | GO:0019866 | organelle inner membrane | IEP | Predicted GO |
CC | GO:0030117 | membrane coat | IEP | Predicted GO |
CC | GO:0030118 | clathrin coat | IEP | Predicted GO |
CC | GO:0030120 | vesicle coat | IEP | Predicted GO |
CC | GO:0030125 | clathrin vesicle coat | IEP | Predicted GO |
CC | GO:0030130 | clathrin coat of trans-Golgi network vesicle | IEP | Predicted GO |
CC | GO:0030132 | clathrin coat of coated pit | IEP | Predicted GO |
MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
BP | GO:0034220 | ion transmembrane transport | IEP | Predicted GO |
CC | GO:0044431 | Golgi apparatus part | IEP | Predicted GO |
CC | GO:0044433 | cytoplasmic vesicle part | IEP | Predicted GO |
CC | GO:0044459 | plasma membrane part | IEP | Predicted GO |
BP | GO:0046034 | ATP metabolic process | IEP | Predicted GO |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | Predicted GO |
BP | GO:0051186 | cofactor metabolic process | IEP | Predicted GO |
BP | GO:0051188 | cofactor biosynthetic process | IEP | Predicted GO |
BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Predicted GO |
BP | GO:0071702 | organic substance transport | IEP | Predicted GO |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | Predicted GO |
BP | GO:0098656 | anion transmembrane transport | IEP | Predicted GO |
CC | GO:0098797 | plasma membrane protein complex | IEP | Predicted GO |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | Predicted GO |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Predicted GO |
BP | GO:1901475 | pyruvate transmembrane transport | IEP | Predicted GO |
BP | GO:1903825 | organic acid transmembrane transport | IEP | Predicted GO |
BP | GO:1905039 | carboxylic acid transmembrane transport | IEP | Predicted GO |
BP | GO:1990542 | mitochondrial transmembrane transport | IEP | Predicted GO |
No external refs found! |