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At2g21090


Description : Pentatricopeptide repeat-containing protein At2g21090 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKQ4]


Gene families : OG_42_0004020 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004020_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At2g21090
Cluster HCCA clusters: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
86162 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Bradi4g35376 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.D01246.1 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00050135-RA No alias (at2g13600 : 432.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
Solyc01g100340 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0007010 cytoskeleton organization IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 86 112
IPR002885 Pentatricopeptide_repeat 350 370
IPR002885 Pentatricopeptide_repeat 244 272
IPR002885 Pentatricopeptide_repeat 143 191
IPR002885 Pentatricopeptide_repeat 377 424
IPR002885 Pentatricopeptide_repeat 274 319
No external refs found!