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  5. Brara.F02892.1

Brara.F02892.1


Description : component *(eS24) of small ribosomal-subunit (SSU) proteome


Gene families : OG_42_0001483 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001483_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F02892.1
Cluster HCAA Clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
271584 No alias Ribosomal protein S24e family protein 0.1 Orthogroups_2024-Update
A4A49_64768 No alias 40s ribosomal protein s24-1 0.15 Orthogroups_2024-Update
At3g04920 No alias 40S ribosomal protein S24-1... 0.07 Orthogroups_2024-Update
Bradi3g08680 No alias Ribosomal protein S24e family protein 0.1 Orthogroups_2024-Update
Brara.I00438.1 No alias component *(eS24) of small ribosomal-subunit (SSU) proteome 0.19 Orthogroups_2024-Update
Cre10.g456200 No alias Ribosomal protein S24e family protein 0.25 Orthogroups_2024-Update
GRMZM2G151252 No alias Ribosomal protein S24e family protein 0.05 Orthogroups_2024-Update
GRMZM2G171426 No alias Ribosomal protein S24e family protein 0.08 Orthogroups_2024-Update
Glyma.03G245300 No alias Ribosomal protein S24e family protein 0.03 Orthogroups_2024-Update
Glyma.10G160300 No alias Ribosomal protein S24e family protein 0.15 Orthogroups_2024-Update
Glyma.19G242700 No alias Ribosomal protein S24e family protein 0.09 Orthogroups_2024-Update
Glyma.20G228100 No alias Ribosomal protein S24e family protein 0.1 Orthogroups_2024-Update
HORVU6Hr1G044840.1 No alias component *(eS24) of small ribosomal-subunit (SSU) proteome 0.08 Orthogroups_2024-Update
HORVU7Hr1G088580.1 No alias component *(eS24) of small ribosomal-subunit (SSU) proteome 0.09 Orthogroups_2024-Update
Kfl00638_0040 kfl00638_0040_v1.1 (at3g04920 : 195.0) Ribosomal protein S24e family... 0.05 Orthogroups_2024-Update
MA_119841g0010 No alias (at3g04920 : 158.0) Ribosomal protein S24e family... 0.05 Orthogroups_2024-Update
MA_119894g0010 No alias (at3g04920 : 188.0) Ribosomal protein S24e family... 0.06 Orthogroups_2024-Update
PSME_00005358-RA No alias (at3g04920 : 189.0) Ribosomal protein S24e family... 0.1 Orthogroups_2024-Update
Potri.010G087800 No alias Ribosomal protein S24e family protein 0.06 Orthogroups_2024-Update
Potri.013G036100 No alias Ribosomal protein S24e family protein 0.14 Orthogroups_2024-Update
Pp1s13_236V6 No alias 40s ribosomal protein 0.02 Orthogroups_2024-Update
Pp1s204_49V6 No alias 40s ribosomal protein 0.19 Orthogroups_2024-Update
Pp1s37_112V6 No alias 40s ribosomal protein 0.18 Orthogroups_2024-Update
Pp1s450_3V6 No alias 40s ribosomal protein 0.04 Orthogroups_2024-Update
Pp1s450_9V6 No alias 40s ribosomal protein 0.22 Orthogroups_2024-Update
Seita.1G028300.1 No alias component *(eS24) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Seita.4G181700.1 No alias component *(eS24) of small ribosomal-subunit (SSU) proteome 0.16 Orthogroups_2024-Update
Seita.5G301700.1 No alias component *(eS24) of small ribosomal-subunit (SSU) proteome 0.06 Orthogroups_2024-Update
Sobic.003G280700.1 No alias component *(eS24) of small ribosomal-subunit (SSU) proteome 0.23 Orthogroups_2024-Update
Sobic.004G099500.1 No alias component *(eS24) of small ribosomal-subunit (SSU) proteome 0.25 Orthogroups_2024-Update
Sobic.010G166100.1 No alias component *(eS24) of small ribosomal-subunit (SSU) proteome 0.11 Orthogroups_2024-Update
Solyc01g097870 No alias 40S ribosomal protein S24 (AHRD V3.3 *** K4B0H4_SOLLC) 0.05 Orthogroups_2024-Update
Solyc06g084230 No alias 40S ribosomal protein S24 (AHRD V3.3 *** K4CUG0_SOLLC) 0.13 Orthogroups_2024-Update
Solyc09g065330 No alias 40S ribosomal protein S24 (AHRD V3.3 *** K4CAS8_SOLLC) 0.25 Orthogroups_2024-Update
Sopen01g041470 No alias Ribosomal protein S24e 0.02 Orthogroups_2024-Update
Sopen09g027090 No alias Ribosomal protein S24e 0.14 Orthogroups_2024-Update
evm.model.contig_2036.17 No alias (at3g04920 : 137.0) Ribosomal protein S24e family... 0.24 Orthogroups_2024-Update
evm.model.tig00000361.64 No alias (at3g04920 : 129.0) Ribosomal protein S24e family... 0.21 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
CC GO:0035145 exon-exon junction complex IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
InterPro domains Description Start Stop
IPR001976 Ribosomal_S24e 25 103
No external refs found!