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  5. Brara.F02899.1

Brara.F02899.1


Description : plant-specific ALOG-type transcription factor


Gene families : OG_42_0000294 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000294_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F02899.1
Cluster HCAA Clusters: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
A4A49_35584 No alias protein light-dependent short hypocotyls 10 0.05 Orthogroups_2024-Update
At1g07090 No alias LSH6 [Source:UniProtKB/TrEMBL;Acc:A0A178WE41] 0.03 Orthogroups_2024-Update
Brara.I05378.1 No alias plant-specific ALOG-type transcription factor 0.04 Orthogroups_2024-Update
Glyma.05G123400 No alias Protein of unknown function (DUF640) 0.03 Orthogroups_2024-Update
Glyma.20G209200 No alias Protein of unknown function (DUF640) 0.03 Orthogroups_2024-Update
Glyma.20G223100 No alias Protein of unknown function (DUF640) 0.03 Orthogroups_2024-Update
LOC_Os05g28040 No alias DUF640 domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_12926g0010 No alias (at3g23290 : 222.0) LIGHT SENSITIVE HYPOCOTYLS 4 (LSH4);... 0.03 Orthogroups_2024-Update
Potri.011G156600 No alias Protein of unknown function (DUF640) 0.04 Orthogroups_2024-Update
Sobic.009G170100.1 No alias plant-specific ALOG-type transcription factor 0.03 Orthogroups_2024-Update
Solyc02g069510 No alias LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)... 0.03 Orthogroups_2024-Update
Solyc10g007310 No alias LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)... 0.03 Orthogroups_2024-Update
Solyc12g014260 No alias LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)... 0.03 Orthogroups_2024-Update
Sopen06g035260 No alias Protein of unknown function (DUF640) 0.03 Orthogroups_2024-Update
Sopen12g006050 No alias Protein of unknown function (DUF640) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004061 arylformamidase activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006569 tryptophan catabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0008200 ion channel inhibitor activity IEP Predicted GO
BP GO:0009063 cellular amino acid catabolic process IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009074 aromatic amino acid family catabolic process IEP Predicted GO
BP GO:0009310 amine catabolic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
MF GO:0016247 channel regulator activity IEP Predicted GO
MF GO:0016248 channel inhibitor activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0017080 sodium channel regulator activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019441 tryptophan catabolic process to kynurenine IEP Predicted GO
MF GO:0019871 sodium channel inhibitor activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0042180 cellular ketone metabolic process IEP Predicted GO
BP GO:0042402 cellular biogenic amine catabolic process IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
BP GO:0042436 indole-containing compound catabolic process IEP Predicted GO
BP GO:0042537 benzene-containing compound metabolic process IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0046218 indolalkylamine catabolic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0070189 kynurenine metabolic process IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
MF GO:0099106 ion channel regulator activity IEP Predicted GO
BP GO:1901606 alpha-amino acid catabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006936 ALOG_dom 16 138
No external refs found!