Brara.F02993.1


Description : mRNA endoribonuclease *(G3BP)


Gene families : OG_42_0000547 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000547_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F02993.1
Cluster HCAA Clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
A4A49_15130 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Bradi1g59930 No alias Nuclear transport factor 2 (NTF2) family protein with... 0.02 Orthogroups_2024-Update
evm.model.tig00000829.14 No alias (at3g25150 : 120.0) Nuclear transport factor 2 (NTF2)... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0043647 inositol phosphate metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Predicted GO
BP GO:0046855 inositol phosphate dephosphorylation IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071545 inositol phosphate catabolic process IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 314 372
IPR002075 NTF2 15 132
No external refs found!