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  5. Brara.F03031.1

Brara.F03031.1


Description : EC_3.2 glycosylase


Gene families : OG_42_0000512 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000512_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F03031.1
Cluster HCAA Clusters: Cluster_398

Target Alias Description ECC score Gene Family Method Actions
At2g33160 No alias Glycoside hydrolase family 28 protein /... 0.03 Orthogroups_2024-Update
At3g07820 No alias Pectin lyase-like superfamily protein... 0.03 Orthogroups_2024-Update
At3g07830 No alias Pectin lyase-like superfamily protein... 0.03 Orthogroups_2024-Update
At4g13760 No alias Pectin lyase-like superfamily protein... 0.03 Orthogroups_2024-Update
Brara.D02006.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Glyma.04G157600 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os06g40890 No alias polygalacturonase, putative, expressed 0.02 Orthogroups_2024-Update
Potri.014G162300 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Seita.4G218200.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Seita.4G218300.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Seita.5G182200.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Seita.9G141800.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 47 375
No external refs found!