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  5. Brara.F03038.1

Brara.F03038.1


Description : A-class RAB GTPase


Gene families : OG_42_0000131 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F03038.1
Cluster HCAA Clusters: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
At1g09630 No alias Ras-related protein RABA2a... 0.03 Orthogroups_2024-Update
Brara.J02319.1 No alias A-class RAB GTPase 0.04 Orthogroups_2024-Update
LOC_Os01g47730 No alias ras-related protein, putative, expressed 0.02 Orthogroups_2024-Update
Solyc02g072180 No alias Rab family GTPase (AHRD V3.3 *** D8SVZ0_SELML) 0.03 Orthogroups_2024-Update
Solyc07g053480 No alias Rab family GTPase (AHRD V3.3 *** D8RE14_SELML) 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA 16Dec
MF GO:0005525 GTP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001806 Small_GTPase 17 177
No external refs found!