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  5. Brara.F03112.1

Brara.F03112.1


Description : zf-HD-type transcription factor


Gene families : OG_42_0000122 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000122_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F03112.1
Cluster HCAA Clusters: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
38995 No alias homeobox protein 33 0.02 Orthogroups_2024-Update
Bradi4g30240 No alias homeobox protein 30 0.03 Orthogroups_2024-Update
GRMZM2G069365 No alias homeobox protein 22 0.02 Orthogroups_2024-Update
Glyma.01G174200 No alias homeobox protein 24 0.01 Orthogroups_2024-Update
HORVU5Hr1G069730.1 No alias zf-HD-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os09g29130 No alias ZF-HD protein dimerisation region containing protein, expressed 0.02 Orthogroups_2024-Update
Potri.002G035200 No alias homeobox protein 33 0.03 Orthogroups_2024-Update
Potri.010G169400 No alias zinc finger homeodomain 1 0.03 Orthogroups_2024-Update
Potri.013G108900 No alias homeobox protein 33 0.03 Orthogroups_2024-Update
Sopen02g016470 No alias ZF-HD protein dimerisation region 0.03 Orthogroups_2024-Update
Sopen03g028760 No alias ZF-HD protein dimerisation region 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Predicted GO
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
BP GO:0043647 inositol phosphate metabolic process IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Predicted GO
BP GO:0046855 inositol phosphate dephosphorylation IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0071545 inositol phosphate catabolic process IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006456 ZF_HD_homeobox_Cys/His_dimer 50 104
No external refs found!