1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.F03140.1

Brara.F03140.1


Description : Unknown function


Gene families : OG_42_0000080 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F03140.1
Cluster HCAA Clusters: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
At1g43910 No alias AAA-ATPase At1g43910 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP11] 0.03 Orthogroups_2024-Update
Brara.F03143.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I03434.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G138770 No alias AAA-ATPase 1 0.03 Orthogroups_2024-Update
HORVU5Hr1G019820.1 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os05g51130 No alias mitochondrial chaperone BCS1, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00029894-RA No alias (at5g57480 : 373.0) P-loop containing nucleoside... 0.02 Orthogroups_2024-Update
Potri.013G047900 No alias AAA-ATPase 1 0.03 Orthogroups_2024-Update
Potri.018G093600 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Sobic.002G319900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.009G252600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc02g087540 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Orthogroups_2024-Update
Solyc10g007280 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
MF GO:0016887 ATPase activity IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025753 AAA_N_dom 50 132
IPR003959 ATPase_AAA_core 245 381
No external refs found!